Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm4945-201ENSMUST00000075152 453 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.68□□□□□ -1.82
Clp1Q99LI9 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Clp1Q99LI9 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Clp1Q99LI9 Gm23697-201ENSMUST00000103897 110 ntBASIC3.67□□□□□ -1.82
Clp1Q99LI9 Gm15861-201ENSMUST00000120979 339 ntBASIC3.67□□□□□ -1.82
Clp1Q99LI9 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.67□□□□□ -1.82
Clp1Q99LI9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Clp1Q99LI9 Gm5224-201ENSMUST00000183060 350 ntBASIC3.67□□□□□ -1.82
Clp1Q99LI9 Gm43199-201ENSMUST00000200019 307 ntBASIC3.67□□□□□ -1.82
Clp1Q99LI9 Gm44564-201ENSMUST00000207985 180 ntBASIC3.67□□□□□ -1.82
Clp1Q99LI9 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.67□□□□□ -1.82
Clp1Q99LI9 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.67□□□□□ -1.82
Clp1Q99LI9 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Clp1Q99LI9 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.67□□□□□ -1.82
Clp1Q99LI9 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clp1Q99LI9 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clp1Q99LI9 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.66□□□□□ -1.82
Clp1Q99LI9 Gm24911-201ENSMUST00000157292 136 ntBASIC3.66□□□□□ -1.82
Clp1Q99LI9 Gm23588-201ENSMUST00000157659 99 ntBASIC3.66□□□□□ -1.82
Clp1Q99LI9 Gm23257-201ENSMUST00000158322 132 ntBASIC3.66□□□□□ -1.82
Clp1Q99LI9 Gm20613-201ENSMUST00000175828 345 ntBASIC3.66□□□□□ -1.82
Clp1Q99LI9 Mir6917-201ENSMUST00000184111 61 ntBASIC3.66□□□□□ -1.82
Clp1Q99LI9 Gm28344-201ENSMUST00000185704 279 ntBASIC3.66□□□□□ -1.82
Clp1Q99LI9 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.66□□□□□ -1.82
Clp1Q99LI9 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.66□□□□□ -1.82
Clp1Q99LI9 Gm25895-201ENSMUST00000083714 100 ntBASIC3.66□□□□□ -1.82
Clp1Q99LI9 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clp1Q99LI9 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Clp1Q99LI9 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Clp1Q99LI9 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Clp1Q99LI9 Gm25915-201ENSMUST00000104265 126 ntBASIC3.65□□□□□ -1.83
Clp1Q99LI9 Gm22988-201ENSMUST00000122759 144 ntBASIC3.65□□□□□ -1.83
Clp1Q99LI9 Gm23957-201ENSMUST00000157209 90 ntBASIC3.65□□□□□ -1.83
Clp1Q99LI9 Gm22075-201ENSMUST00000158599 192 ntBASIC3.65□□□□□ -1.83
Clp1Q99LI9 Mir28b-201ENSMUST00000175399 80 ntBASIC3.65□□□□□ -1.83
Clp1Q99LI9 Gm25933-201ENSMUST00000178943 108 ntBASIC3.65□□□□□ -1.83
Clp1Q99LI9 Mir6914-201ENSMUST00000184999 69 ntBASIC3.65□□□□□ -1.83
Clp1Q99LI9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.65□□□□□ -1.83
Clp1Q99LI9 Gm5829-201ENSMUST00000191383 351 ntBASIC3.65□□□□□ -1.83
Clp1Q99LI9 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.65□□□□□ -1.83
Clp1Q99LI9 Gm25081-201ENSMUST00000082534 108 ntBASIC3.65□□□□□ -1.83
Clp1Q99LI9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Clp1Q99LI9 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Clp1Q99LI9 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.64□□□□□ -1.83
Clp1Q99LI9 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.64□□□□□ -1.83
Clp1Q99LI9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC3.64□□□□□ -1.83
Clp1Q99LI9 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Clp1Q99LI9 Gm13801-201ENSMUST00000120750 160 ntBASIC3.64□□□□□ -1.83
Clp1Q99LI9 Gm23183-201ENSMUST00000122595 323 ntBASIC3.64□□□□□ -1.83
Clp1Q99LI9 Gm24131-201ENSMUST00000158539 107 ntBASIC3.64□□□□□ -1.83
Clp1Q99LI9 Gm28030-201ENSMUST00000184987 138 ntBASIC3.64□□□□□ -1.83
Clp1Q99LI9 Gm43749-201ENSMUST00000199345 352 ntBASIC3.64□□□□□ -1.83
Clp1Q99LI9 Gm43899-201ENSMUST00000203675 246 ntBASIC3.64□□□□□ -1.83
Clp1Q99LI9 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.64□□□□□ -1.83
Clp1Q99LI9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.64□□□□□ -1.83
Clp1Q99LI9 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.64□□□□□ -1.83
Clp1Q99LI9 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.64□□□□□ -1.83
Clp1Q99LI9 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.64□□□□□ -1.83
Clp1Q99LI9 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.63□□□□□ -1.83
Clp1Q99LI9 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Clp1Q99LI9 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Clp1Q99LI9 Gm24276-201ENSMUST00000102181 110 ntBASIC3.63□□□□□ -1.83
Clp1Q99LI9 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Clp1Q99LI9 Gm15190-201ENSMUST00000120855 276 ntBASIC3.63□□□□□ -1.83
Clp1Q99LI9 Gm24896-201ENSMUST00000122741 135 ntBASIC3.63□□□□□ -1.83
Clp1Q99LI9 Gm22553-201ENSMUST00000157797 295 ntBASIC3.63□□□□□ -1.83
Clp1Q99LI9 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.63□□□□□ -1.83
Clp1Q99LI9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Clp1Q99LI9 Gm44964-201ENSMUST00000207011 273 ntBASIC3.63□□□□□ -1.83
Clp1Q99LI9 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.63□□□□□ -1.83
Clp1Q99LI9 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Clp1Q99LI9 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.63□□□□□ -1.83
Clp1Q99LI9 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.63□□□□□ -1.83
Clp1Q99LI9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Clp1Q99LI9 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Clp1Q99LI9 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Clp1Q99LI9 Snord89-201ENSMUST00000104516 110 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 Mir291a-201ENSMUST00000104815 82 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 Gm13885-201ENSMUST00000117569 187 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 Gm23101-201ENSMUST00000157550 137 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 Gm16404-201ENSMUST00000177739 468 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 Gm14598-201ENSMUST00000180109 468 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 Gm14625-201ENSMUST00000180231 468 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Clp1Q99LI9 Gm44425-201ENSMUST00000203739 429 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 Gm5358-201ENSMUST00000212814 353 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 Gm10025-201ENSMUST00000079568 372 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.62□□□□□ -1.83
Clp1Q99LI9 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Clp1Q99LI9 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Clp1Q99LI9 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Clp1Q99LI9 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms