Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir6938-201ENSMUST00000184173 63 ntBASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Gm23925-201ENSMUST00000082471 132 ntBASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Mir218-1-201ENSMUST00000083669 110 ntBASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim47Q8C0E3 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Gm42785-201ENSMUST00000202316 3835 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm23175-201ENSMUST00000104371 132 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm22497-201ENSMUST00000104499 131 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm26249-201ENSMUST00000116708 118 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm13314-201ENSMUST00000118742 335 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm16327-201ENSMUST00000137146 228 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm23231-201ENSMUST00000157299 104 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm24959-201ENSMUST00000157924 146 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm24601-201ENSMUST00000157970 143 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm22729-201ENSMUST00000158088 129 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Mir3083-201ENSMUST00000175377 64 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm5829-201ENSMUST00000191383 351 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm45031-201ENSMUST00000206800 288 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm18000-201ENSMUST00000212153 800 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 mt-Tv-201ENSMUST00000082389 69 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm25480-201ENSMUST00000083217 133 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim47Q8C0E3 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim47Q8C0E3 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim47Q8C0E3 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Gm23718-201ENSMUST00000157350 307 ntBASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Gm24061-201ENSMUST00000157489 120 ntBASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Gm28992-201ENSMUST00000190534 139 ntBASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Gm37918-201ENSMUST00000192071 120 ntBASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Gm44976-201ENSMUST00000205543 261 ntBASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Gm16976-205ENSMUST00000227324 226 ntBASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Snord15a-201ENSMUST00000083888 148 ntBASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim47Q8C0E3 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Gm25168-201ENSMUST00000104189 132 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Gm24376-201ENSMUST00000104399 127 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Gm14973-201ENSMUST00000117248 255 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Gm12351-201ENSMUST00000118727 292 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Gm25066-201ENSMUST00000158145 123 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Gm29535-201ENSMUST00000185723 109 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Gm28143-201ENSMUST00000191082 109 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Gm44358-201ENSMUST00000196301 98 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Gm44355-201ENSMUST00000200417 104 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Gm25630-201ENSMUST00000084000 162 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Gm26327-201ENSMUST00000093724 111 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim47Q8C0E3 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.04□□□□□ -1.76
Trim47Q8C0E3 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Trim47Q8C0E3 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Gm24892-201ENSMUST00000122747 104 ntBASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Gm25289-201ENSMUST00000122799 119 ntBASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Gm23540-201ENSMUST00000157543 164 ntBASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Gm22890-201ENSMUST00000158642 144 ntBASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Gm38364-201ENSMUST00000191814 179 ntBASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Mir7682-201ENSMUST00000198467 58 ntBASIC4.03□□□□□ -1.76
Trim47Q8C0E3 CT009696.1-201ENSMUST00000215745 256 ntBASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Gm22245-201ENSMUST00000082479 103 ntBASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Gm24147-201ENSMUST00000082763 144 ntBASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Gm26168-201ENSMUST00000083787 112 ntBASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim47Q8C0E3 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Gm22115-201ENSMUST00000103976 133 ntBASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Gm23923-201ENSMUST00000104108 133 ntBASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Gm23599-201ENSMUST00000157261 251 ntBASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Gm22515-201ENSMUST00000158273 305 ntBASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Ighv1-1-201ENSMUST00000194912 291 ntBASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Gm37290-201ENSMUST00000195775 339 ntBASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Gm42719-201ENSMUST00000197393 355 ntBASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Gm45080-201ENSMUST00000206648 283 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms