Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Mir3096-201ENSMUST00000116685 71 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Gm15067-201ENSMUST00000119534 156 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Gm13396-201ENSMUST00000120617 271 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Gm6956-201ENSMUST00000134724 546 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Gm17161-201ENSMUST00000169187 524 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Gm20462-201ENSMUST00000172623 408 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Gm21885-201ENSMUST00000178891 327 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Gm27410-201ENSMUST00000183851 115 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Mir6950-201ENSMUST00000184438 73 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Mir7021-201ENSMUST00000197026 63 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Gm23721-201ENSMUST00000083005 107 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Gm24907-201ENSMUST00000116932 128 ntBASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Gm11420-201ENSMUST00000120047 402 ntBASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Gm25543-201ENSMUST00000122678 312 ntBASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Gm27511-201ENSMUST00000183502 127 ntBASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Mir7026-201ENSMUST00000184384 67 ntBASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.88□□□□□ -2.11
Nup54Q8BTS4 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.88□□□□□ -2.11
Nup54Q8BTS4 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Gm25589-201ENSMUST00000082502 166 ntBASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Mir29c-201ENSMUST00000083614 88 ntBASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Gm23041-201ENSMUST00000083868 106 ntBASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Nup54Q8BTS4 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm25059-201ENSMUST00000157367 117 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm24480-201ENSMUST00000157442 103 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 U6.1-201ENSMUST00000157443 101 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm23043-201ENSMUST00000157890 109 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm25434-201ENSMUST00000158278 167 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm7592-201ENSMUST00000160674 627 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm27544-201ENSMUST00000185069 155 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm28848-201ENSMUST00000189984 168 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm18617-201ENSMUST00000222311 259 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm7214-201ENSMUST00000222428 272 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm24151-201ENSMUST00000082758 141 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.87□□□□□ -2.11
Nup54Q8BTS4 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm25090-201ENSMUST00000104000 132 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm14296-202ENSMUST00000108931 750 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm22713-201ENSMUST00000116895 130 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm13439-201ENSMUST00000117541 409 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm13432-201ENSMUST00000118861 241 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm11798-201ENSMUST00000119150 421 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm14574-201ENSMUST00000120644 279 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm14972-201ENSMUST00000121780 364 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm24499-201ENSMUST00000158446 104 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm26024-201ENSMUST00000158657 322 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Mir7679-201ENSMUST00000183379 63 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Mir6995-201ENSMUST00000183658 71 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm37778-201ENSMUST00000191732 190 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm42672-201ENSMUST00000197821 352 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm43865-201ENSMUST00000204721 127 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm44564-201ENSMUST00000207985 180 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm44666-201ENSMUST00000208544 391 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Snord68-201ENSMUST00000082516 86 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Mir301-201ENSMUST00000083655 86 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Gm23731-201ENSMUST00000083749 107 ntBASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Nup54Q8BTS4 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Gm24984-201ENSMUST00000104454 133 ntBASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Gm22113-201ENSMUST00000158343 104 ntBASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Gm24837-201ENSMUST00000158683 81 ntBASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Gm42807-201ENSMUST00000200141 329 ntBASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Gm43976-201ENSMUST00000203637 235 ntBASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Gm44687-201ENSMUST00000204975 235 ntBASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.85□□□□□ -2.11
Nup54Q8BTS4 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Gm26175-201ENSMUST00000083794 131 ntBASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Nup54Q8BTS4 Gm15215-201ENSMUST00000117773 489 ntBASIC1.84□□□□□ -2.11
Nup54Q8BTS4 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.84□□□□□ -2.11
Nup54Q8BTS4 Gm24896-201ENSMUST00000122741 135 ntBASIC1.84□□□□□ -2.11
Nup54Q8BTS4 Gm24177-201ENSMUST00000158927 131 ntBASIC1.84□□□□□ -2.11
Nup54Q8BTS4 Mir28b-201ENSMUST00000175399 80 ntBASIC1.84□□□□□ -2.11
Nup54Q8BTS4 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.84□□□□□ -2.11
Nup54Q8BTS4 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.84□□□□□ -2.11
Nup54Q8BTS4 Mir7118-201ENSMUST00000197760 61 ntBASIC1.84□□□□□ -2.11
Nup54Q8BTS4 Gm44482-201ENSMUST00000199232 103 ntBASIC1.84□□□□□ -2.11
Nup54Q8BTS4 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms