Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm25168-201ENSMUST00000104189 132 ntBASIC3.66□□□□□ -1.82
Trim56Q80VI1 Gm25728-201ENSMUST00000104525 159 ntBASIC3.66□□□□□ -1.82
Trim56Q80VI1 Gm4468-201ENSMUST00000170206 294 ntBASIC3.66□□□□□ -1.82
Trim56Q80VI1 Mir7667-201ENSMUST00000183866 63 ntBASIC3.66□□□□□ -1.82
Trim56Q80VI1 Gm29602-201ENSMUST00000186887 442 ntBASIC3.66□□□□□ -1.82
Trim56Q80VI1 Gm26265-202ENSMUST00000196326 133 ntBASIC3.66□□□□□ -1.82
Trim56Q80VI1 Gm24453-201ENSMUST00000083346 76 ntBASIC3.66□□□□□ -1.82
Trim56Q80VI1 Gm22828-201ENSMUST00000083768 107 ntBASIC3.66□□□□□ -1.82
Trim56Q80VI1 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim56Q80VI1 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.65□□□□□ -1.82
Trim56Q80VI1 Gm22023-201ENSMUST00000104354 130 ntBASIC3.65□□□□□ -1.83
Trim56Q80VI1 Gm23175-201ENSMUST00000104371 132 ntBASIC3.65□□□□□ -1.83
Trim56Q80VI1 Gm22713-201ENSMUST00000116895 130 ntBASIC3.65□□□□□ -1.83
Trim56Q80VI1 Gm12449-201ENSMUST00000117572 234 ntBASIC3.65□□□□□ -1.83
Trim56Q80VI1 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Trim56Q80VI1 Gm17113-201ENSMUST00000170118 171 ntBASIC3.65□□□□□ -1.83
Trim56Q80VI1 Mir8096-201ENSMUST00000184526 127 ntBASIC3.65□□□□□ -1.83
Trim56Q80VI1 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.65□□□□□ -1.83
Trim56Q80VI1 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Trim56Q80VI1 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.65□□□□□ -1.83
Trim56Q80VI1 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim56Q80VI1 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.65□□□□□ -1.83
Trim56Q80VI1 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.64□□□□□ -1.83
Trim56Q80VI1 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trim56Q80VI1 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm23886-201ENSMUST00000122684 313 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm24878-201ENSMUST00000158782 104 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm22192-201ENSMUST00000175128 85 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm26097-201ENSMUST00000179642 93 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm27793-201ENSMUST00000183405 76 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Mir6399-201ENSMUST00000184050 84 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm27249-201ENSMUST00000185049 328 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm29597-201ENSMUST00000188035 308 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm33866-201ENSMUST00000196911 289 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.64□□□□□ -1.83
Trim56Q80VI1 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Gm25632-201ENSMUST00000083112 85 ntBASIC3.64□□□□□ -1.83
Trim56Q80VI1 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim56Q80VI1 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trim56Q80VI1 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trim56Q80VI1 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trim56Q80VI1 Gm25308-201ENSMUST00000104171 158 ntBASIC3.63□□□□□ -1.83
Trim56Q80VI1 Gm12351-201ENSMUST00000118727 292 ntBASIC3.63□□□□□ -1.83
Trim56Q80VI1 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.63□□□□□ -1.83
Trim56Q80VI1 Mir1966-201ENSMUST00000158807 108 ntBASIC3.63□□□□□ -1.83
Trim56Q80VI1 Gm26291-201ENSMUST00000158889 137 ntBASIC3.63□□□□□ -1.83
Trim56Q80VI1 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trim56Q80VI1 Gm37693-201ENSMUST00000194562 234 ntBASIC3.63□□□□□ -1.83
Trim56Q80VI1 Gm43199-201ENSMUST00000200019 307 ntBASIC3.63□□□□□ -1.83
Trim56Q80VI1 Gm44182-201ENSMUST00000204052 115 ntBASIC3.63□□□□□ -1.83
Trim56Q80VI1 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.63□□□□□ -1.83
Trim56Q80VI1 Gm23239-201ENSMUST00000083006 181 ntBASIC3.63□□□□□ -1.83
Trim56Q80VI1 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim56Q80VI1 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim56Q80VI1 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim56Q80VI1 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.62□□□□□ -1.83
Trim56Q80VI1 Snord14c-201ENSMUST00000101927 86 ntBASIC3.62□□□□□ -1.83
Trim56Q80VI1 Gm26249-201ENSMUST00000116708 118 ntBASIC3.62□□□□□ -1.83
Trim56Q80VI1 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.62□□□□□ -1.83
Trim56Q80VI1 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.62□□□□□ -1.83
Trim56Q80VI1 Gm42623-201ENSMUST00000197225 379 ntBASIC3.62□□□□□ -1.83
Trim56Q80VI1 Gm45445-201ENSMUST00000209586 232 ntBASIC3.62□□□□□ -1.83
Trim56Q80VI1 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.62□□□□□ -1.83
Trim56Q80VI1 Gm18617-201ENSMUST00000222311 259 ntBASIC3.62□□□□□ -1.83
Trim56Q80VI1 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.62□□□□□ -1.83
Trim56Q80VI1 Gm24625-201ENSMUST00000082622 130 ntBASIC3.62□□□□□ -1.83
Trim56Q80VI1 Mir184-201ENSMUST00000083662 69 ntBASIC3.62□□□□□ -1.83
Trim56Q80VI1 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim56Q80VI1 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim56Q80VI1 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim56Q80VI1 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Trim56Q80VI1 Gm24276-201ENSMUST00000102181 110 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim56Q80VI1 Gm15497-201ENSMUST00000119137 551 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 Gm11786-201ENSMUST00000120799 155 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 Gm24061-201ENSMUST00000157489 120 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 Gm25066-201ENSMUST00000158145 123 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 Gm22476-201ENSMUST00000158902 100 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 Gm23933-201ENSMUST00000178405 79 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim56Q80VI1 Gm44470-201ENSMUST00000203913 142 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 Snora70-201ENSMUST00000083047 137 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim56Q80VI1 Gm14914-201ENSMUST00000117576 2031 ntBASIC3.61□□□□□ -1.83
Trim56Q80VI1 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim56Q80VI1 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Trim56Q80VI1 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim56Q80VI1 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim56Q80VI1 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 Gm26135-201ENSMUST00000101993 72 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms