Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm22571-201ENSMUST00000082984 70 ntBASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Gm26249-201ENSMUST00000116708 118 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Gm25808-201ENSMUST00000122784 284 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Gm26468-201ENSMUST00000158644 106 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Gm16111-201ENSMUST00000162128 285 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Gm24818-201ENSMUST00000175093 161 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Gm27220-201ENSMUST00000183453 262 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Gm28849-201ENSMUST00000188127 174 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Gm28330-201ENSMUST00000190353 171 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Gm6801-201ENSMUST00000190697 339 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Mir376a-201ENSMUST00000197584 68 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Gm25589-201ENSMUST00000082502 166 ntBASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Ubfd1Q78JW9 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm24116-201ENSMUST00000103975 107 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Snord70-201ENSMUST00000104157 87 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm26247-201ENSMUST00000116702 91 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm14792-201ENSMUST00000119725 258 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm13862-201ENSMUST00000121220 197 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm16355-201ENSMUST00000128606 231 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm24909-201ENSMUST00000157290 280 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm23381-201ENSMUST00000157676 94 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm24681-201ENSMUST00000158760 107 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm22011-201ENSMUST00000158790 123 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm17067-202ENSMUST00000180131 123 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Mir8103-201ENSMUST00000183945 107 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm44966-201ENSMUST00000208096 157 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Ubfd1Q78JW9 Gm25875-201ENSMUST00000104323 107 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Mir466k-201ENSMUST00000116774 122 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Gm6829-201ENSMUST00000119858 360 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Gm25470-201ENSMUST00000175576 111 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Gm23190-201ENSMUST00000180307 64 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Gm27271-201ENSMUST00000183509 170 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Gm29553-201ENSMUST00000189692 279 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Gm42578-201ENSMUST00000199960 194 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Gm23246-201ENSMUST00000083371 67 ntBASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ubfd1Q78JW9 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Mir682-201ENSMUST00000102281 96 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Gm12351-201ENSMUST00000118727 292 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Gm26479-201ENSMUST00000122620 106 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Gm25059-201ENSMUST00000157367 117 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Gm22215-201ENSMUST00000157558 96 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Gm22315-201ENSMUST00000158010 143 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Gm23895-201ENSMUST00000158108 160 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Gm24922-201ENSMUST00000158511 102 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Gm25933-201ENSMUST00000178943 108 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Trbv18-201ENSMUST00000194256 294 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ubfd1Q78JW9 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Gm22782-201ENSMUST00000104082 132 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Gm24122-201ENSMUST00000104107 132 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Gm22674-201ENSMUST00000104413 131 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Gm13885-201ENSMUST00000117569 187 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Gm23470-201ENSMUST00000157129 120 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Gm24480-201ENSMUST00000157442 103 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Gm25888-201ENSMUST00000157778 302 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Gm25643-201ENSMUST00000158874 103 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Snord53-201ENSMUST00000175146 78 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Gm24816-201ENSMUST00000175311 151 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Mir3103-201ENSMUST00000175474 67 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Mir6405-201ENSMUST00000184584 124 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Gm18346-201ENSMUST00000216782 325 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Gm25930-201ENSMUST00000082785 107 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms