Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.07□□□□□ -2.08
Sdc3Q64519 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Sdc3Q64519 Gm23120-201ENSMUST00000157654 287 ntBASIC2.06□□□□□ -2.08
Sdc3Q64519 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.06□□□□□ -2.08
Sdc3Q64519 Gm17100-201ENSMUST00000168963 272 ntBASIC2.06□□□□□ -2.08
Sdc3Q64519 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.06□□□□□ -2.08
Sdc3Q64519 Gm37377-201ENSMUST00000191733 304 ntBASIC2.06□□□□□ -2.08
Sdc3Q64519 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.06□□□□□ -2.08
Sdc3Q64519 Gm25402-201ENSMUST00000082966 131 ntBASIC2.06□□□□□ -2.08
Sdc3Q64519 Gm23041-201ENSMUST00000083868 106 ntBASIC2.06□□□□□ -2.08
Sdc3Q64519 Gm26314-201ENSMUST00000083891 107 ntBASIC2.06□□□□□ -2.08
Sdc3Q64519 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Sdc3Q64519 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Sdc3Q64519 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Sdc3Q64519 Mir759-201ENSMUST00000103254 98 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm12941-201ENSMUST00000117934 220 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm23324-201ENSMUST00000157421 131 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm22843-201ENSMUST00000157710 134 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm24837-201ENSMUST00000158683 81 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm17919-201ENSMUST00000173344 312 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm25671-201ENSMUST00000178612 105 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm23307-201ENSMUST00000179167 105 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm25286-201ENSMUST00000179790 105 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm28717-201ENSMUST00000189950 315 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm37313-201ENSMUST00000191673 290 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.05□□□□□ -2.08
Sdc3Q64519 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Sdc3Q64519 Snord68-201ENSMUST00000082516 86 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Mir322-201ENSMUST00000083484 95 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Sdc3Q64519 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.05□□□□□ -2.08
Sdc3Q64519 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Sdc3Q64519 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Sdc3Q64519 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Sdc3Q64519 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm24907-201ENSMUST00000116932 128 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm13439-201ENSMUST00000117541 409 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm14307-201ENSMUST00000118930 291 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm14678-201ENSMUST00000121396 482 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm14297-201ENSMUST00000129110 291 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm25368-201ENSMUST00000158847 131 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm16326-201ENSMUST00000162843 414 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm23813-201ENSMUST00000175153 77 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Sdc3Q64519 Mir6951-201ENSMUST00000183910 75 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm27878-201ENSMUST00000184000 106 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Mir6997-201ENSMUST00000184313 71 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm43676-201ENSMUST00000197532 540 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm3724-201ENSMUST00000197957 349 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm25788-201ENSMUST00000082721 131 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Mir29c-201ENSMUST00000083614 88 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Snora69-201ENSMUST00000083708 131 ntBASIC2.04□□□□□ -2.08
Sdc3Q64519 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Sdc3Q64519 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 Gm23469-201ENSMUST00000157131 104 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 Gm25059-201ENSMUST00000157367 117 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 Gm23779-201ENSMUST00000157938 64 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 Gm24726-201ENSMUST00000158232 121 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 Gm26157-201ENSMUST00000158974 126 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Sdc3Q64519 Mir8090-201ENSMUST00000185078 136 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 Gm28418-201ENSMUST00000186179 423 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 Gm37404-201ENSMUST00000195726 359 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 Gm44468-201ENSMUST00000199516 105 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 Gm23731-201ENSMUST00000083749 107 ntBASIC2.03□□□□□ -2.08
Sdc3Q64519 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.03□□□□□ -2.08
Sdc3Q64519 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.03□□□□□ -2.09
Sdc3Q64519 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.03□□□□□ -2.09
Sdc3Q64519 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Sdc3Q64519 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Sdc3Q64519 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Sdc3Q64519 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm25781-201ENSMUST00000122527 84 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm25543-201ENSMUST00000122678 312 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm25115-201ENSMUST00000157187 140 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm24480-201ENSMUST00000157442 103 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm24010-201ENSMUST00000157731 282 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm22316-201ENSMUST00000158012 216 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm26400-201ENSMUST00000175012 85 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm24487-201ENSMUST00000178017 63 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm22263-201ENSMUST00000180060 104 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm20257-202ENSMUST00000188643 130 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm37162-201ENSMUST00000191708 551 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.02□□□□□ -2.09
Sdc3Q64519 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms