Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm22062-201ENSMUST00000082563 107 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 Gm22154-201ENSMUST00000083844 131 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.44□□□□□ -1.86
Trim28Q62318 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Trim28Q62318 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim28Q62318 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim28Q62318 Gm22496-201ENSMUST00000104493 88 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Gm11065-201ENSMUST00000111462 228 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim28Q62318 Gm25621-201ENSMUST00000157223 114 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Gm22225-201ENSMUST00000157358 278 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Gm25863-201ENSMUST00000158249 329 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Gm22611-201ENSMUST00000158288 150 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Gm22989-201ENSMUST00000158313 86 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Gm23197-201ENSMUST00000158809 112 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Gm25470-201ENSMUST00000175576 111 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Gm25175-201ENSMUST00000178712 79 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Gm25987-201ENSMUST00000083234 107 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Gm10813-201ENSMUST00000099936 90 ntBASIC3.43□□□□□ -1.86
Trim28Q62318 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim28Q62318 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.42□□□□□ -1.86
Trim28Q62318 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.42□□□□□ -1.86
Trim28Q62318 Gm6829-201ENSMUST00000119858 360 ntBASIC3.42□□□□□ -1.86
Trim28Q62318 Gm24736-201ENSMUST00000158862 130 ntBASIC3.42□□□□□ -1.86
Trim28Q62318 Gm24082-201ENSMUST00000175175 83 ntBASIC3.42□□□□□ -1.86
Trim28Q62318 Gm25615-201ENSMUST00000177836 94 ntBASIC3.42□□□□□ -1.86
Trim28Q62318 Gm23922-201ENSMUST00000178792 79 ntBASIC3.42□□□□□ -1.86
Trim28Q62318 Gm24657-201ENSMUST00000180085 79 ntBASIC3.42□□□□□ -1.86
Trim28Q62318 Gm22996-201ENSMUST00000180236 79 ntBASIC3.42□□□□□ -1.86
Trim28Q62318 Gm23650-201ENSMUST00000083355 70 ntBASIC3.42□□□□□ -1.86
Trim28Q62318 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim28Q62318 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.42□□□□□ -1.86
Trim28Q62318 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trim28Q62318 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trim28Q62318 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm14782-201ENSMUST00000120151 195 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm24839-201ENSMUST00000122602 107 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm23219-201ENSMUST00000158123 87 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm22500-201ENSMUST00000158982 99 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm37428-201ENSMUST00000193886 137 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm43193-201ENSMUST00000197732 441 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm44470-201ENSMUST00000203913 142 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.41□□□□□ -1.86
Trim28Q62318 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm25814-201ENSMUST00000082754 107 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm26494-201ENSMUST00000083154 143 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm24616-201ENSMUST00000083274 139 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Mir146-201ENSMUST00000083667 65 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm24762-201ENSMUST00000083689 104 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm24493-201ENSMUST00000083805 143 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim28Q62318 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.41□□□□□ -1.86
Trim28Q62318 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Trim28Q62318 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.4□□□□□ -1.86
Trim28Q62318 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Trim28Q62318 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trim28Q62318 Gm24172-201ENSMUST00000104127 117 ntBASIC3.4□□□□□ -1.87
Trim28Q62318 Gm23956-201ENSMUST00000157211 119 ntBASIC3.4□□□□□ -1.87
Trim28Q62318 Gm26195-201ENSMUST00000175035 101 ntBASIC3.4□□□□□ -1.87
Trim28Q62318 Gm44010-201ENSMUST00000204432 331 ntBASIC3.4□□□□□ -1.87
Trim28Q62318 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.4□□□□□ -1.87
Trim28Q62318 AC168880.2-201ENSMUST00000224488 201 ntBASIC3.4□□□□□ -1.87
Trim28Q62318 Gm4945-201ENSMUST00000075152 453 ntBASIC3.4□□□□□ -1.87
Trim28Q62318 Gm22622-201ENSMUST00000082870 129 ntBASIC3.4□□□□□ -1.87
Trim28Q62318 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim28Q62318 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.39□□□□□ -1.87
Trim28Q62318 Gm12550-201ENSMUST00000118478 329 ntBASIC3.39□□□□□ -1.87
Trim28Q62318 Gm23183-201ENSMUST00000122595 323 ntBASIC3.39□□□□□ -1.87
Trim28Q62318 Gm23466-201ENSMUST00000157133 106 ntBASIC3.39□□□□□ -1.87
Trim28Q62318 Gm23982-201ENSMUST00000157141 106 ntBASIC3.39□□□□□ -1.87
Trim28Q62318 Gm26411-201ENSMUST00000157668 107 ntBASIC3.39□□□□□ -1.87
Trim28Q62318 Gm26291-201ENSMUST00000158889 137 ntBASIC3.39□□□□□ -1.87
Trim28Q62318 Gm43978-201ENSMUST00000203491 451 ntBASIC3.39□□□□□ -1.87
Trim28Q62318 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim28Q62318 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
Trim28Q62318 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim28Q62318 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Gm14922-201ENSMUST00000121131 163 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Gm16218-201ENSMUST00000155424 388 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Gm25476-201ENSMUST00000175125 185 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Gm26337-201ENSMUST00000178000 79 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.38□□□□□ -1.87
Trim28Q62318 Mir7068-201ENSMUST00000183439 74 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Mir8106-201ENSMUST00000184520 139 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Gm37281-201ENSMUST00000192412 439 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim28Q62318 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Gm23454-201ENSMUST00000083332 133 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.38□□□□□ -1.87
Trim28Q62318 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.37□□□□□ -1.87
Trim28Q62318 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim28Q62318 Gm24263-201ENSMUST00000104059 107 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 346.9 ms