Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm44024-201ENSMUST00000203008 476 ntBASIC2.17□□□□□ -2.06
Ctr9Q62018 Gm45654-201ENSMUST00000210980 123 ntBASIC2.17□□□□□ -2.06
Ctr9Q62018 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.17□□□□□ -2.06
Ctr9Q62018 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.17□□□□□ -2.06
Ctr9Q62018 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.17□□□□□ -2.06
Ctr9Q62018 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ctr9Q62018 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ctr9Q62018 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm13339-201ENSMUST00000120651 510 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm15281-201ENSMUST00000125181 351 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm24005-201ENSMUST00000158459 296 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Mir7678-201ENSMUST00000185076 71 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm29397-201ENSMUST00000185205 333 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm45296-201ENSMUST00000209625 205 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.16□□□□□ -2.06
Ctr9Q62018 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 AC158981.3-202ENSMUST00000228906 523 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm24151-201ENSMUST00000082758 141 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm25896-201ENSMUST00000083713 136 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.16□□□□□ -2.06
Ctr9Q62018 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Ctr9Q62018 Gm22021-201ENSMUST00000104353 107 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Mdga2-203ENSMUST00000113942 423 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm24275-201ENSMUST00000116780 146 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm15010-201ENSMUST00000117153 407 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm14774-201ENSMUST00000117857 536 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm13518-201ENSMUST00000120018 233 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm13588-201ENSMUST00000120026 135 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm23230-201ENSMUST00000157298 133 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm20462-201ENSMUST00000172623 408 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Mir6950-201ENSMUST00000184438 73 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.15□□□□□ -2.07
Ctr9Q62018 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Ctr9Q62018 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Ctr9Q62018 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm26314-201ENSMUST00000083891 107 ntBASIC2.15□□□□□ -2.07
Ctr9Q62018 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.15□□□□□ -2.07
Ctr9Q62018 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Ctr9Q62018 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ctr9Q62018 Gm13672-201ENSMUST00000117554 459 ntBASIC2.14□□□□□ -2.07
Ctr9Q62018 Gm12646-201ENSMUST00000119144 238 ntBASIC2.14□□□□□ -2.07
Ctr9Q62018 Gm14980-201ENSMUST00000121247 736 ntBASIC2.14□□□□□ -2.07
Ctr9Q62018 Gm25625-201ENSMUST00000157221 96 ntBASIC2.14□□□□□ -2.07
Ctr9Q62018 U6.1-201ENSMUST00000157443 101 ntBASIC2.14□□□□□ -2.07
Ctr9Q62018 Gm22085-201ENSMUST00000158344 110 ntBASIC2.14□□□□□ -2.07
Ctr9Q62018 Gm17161-201ENSMUST00000169187 524 ntBASIC2.14□□□□□ -2.07
Ctr9Q62018 Gm24388-201ENSMUST00000177872 107 ntBASIC2.14□□□□□ -2.07
Ctr9Q62018 Gm25457-201ENSMUST00000179509 107 ntBASIC2.14□□□□□ -2.07
Ctr9Q62018 Mir6355-201ENSMUST00000183687 106 ntBASIC2.14□□□□□ -2.07
Ctr9Q62018 Gm27544-201ENSMUST00000185069 155 ntBASIC2.14□□□□□ -2.07
Ctr9Q62018 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ctr9Q62018 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ctr9Q62018 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ctr9Q62018 Gm16038-201ENSMUST00000159317 193 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
Ctr9Q62018 Gm27511-201ENSMUST00000183502 127 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 Mir6352-201ENSMUST00000184495 116 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 Gm34015-201ENSMUST00000194908 451 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 Gm44337-201ENSMUST00000196553 114 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.13□□□□□ -2.07
Ctr9Q62018 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 Snord42a-201ENSMUST00000082606 65 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 Gm26265-201ENSMUST00000083277 135 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 Mir301-201ENSMUST00000083655 86 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 Gm23041-201ENSMUST00000083868 106 ntBASIC2.13□□□□□ -2.07
Ctr9Q62018 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Ctr9Q62018 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Ctr9Q62018 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm23670-201ENSMUST00000157469 119 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm24724-201ENSMUST00000158230 107 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm24726-201ENSMUST00000158232 121 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm21978-201ENSMUST00000179696 377 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm28661-201ENSMUST00000188231 681 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm20257-202ENSMUST00000188643 130 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Ctr9Q62018 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm26922-201ENSMUST00000082687 72 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm23462-201ENSMUST00000083264 104 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm23731-201ENSMUST00000083749 107 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm25651-201ENSMUST00000083782 119 ntBASIC2.12□□□□□ -2.07
Ctr9Q62018 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Ctr9Q62018 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ctr9Q62018 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms