Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm26914-201ENSMUST00000182262 223 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 Mir7077-201ENSMUST00000183991 57 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 Gm29661-201ENSMUST00000186781 315 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 Gm29308-201ENSMUST00000188863 315 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 Gm28408-201ENSMUST00000191557 463 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 Gm37869-201ENSMUST00000193385 595 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 Gm37089-201ENSMUST00000195616 129 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 Gm40810-201ENSMUST00000219149 253 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 Gm30738-201ENSMUST00000221346 502 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.17□□□□□ -2.38
Trav6d-4Q5R1I0 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm12889-201ENSMUST00000118684 241 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm24892-201ENSMUST00000122747 104 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm23390-201ENSMUST00000157393 106 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm24476-201ENSMUST00000157437 131 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm22706-201ENSMUST00000157907 112 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm23196-201ENSMUST00000158806 107 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm22403-201ENSMUST00000174919 84 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Mir5104-201ENSMUST00000175319 94 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm22111-201ENSMUST00000178010 79 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm23687-201ENSMUST00000178664 79 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm24566-201ENSMUST00000179286 79 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm23305-201ENSMUST00000179342 79 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm26389-201ENSMUST00000179819 79 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm22130-201ENSMUST00000179979 79 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm22393-201ENSMUST00000180153 79 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm25085-201ENSMUST00000180298 79 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm37319-201ENSMUST00000193500 636 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm2829-201ENSMUST00000213121 499 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 AC167192.4-201ENSMUST00000224087 993 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 AC154692.1-201ENSMUST00000228314 544 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm22620-201ENSMUST00000082700 133 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm24208-201ENSMUST00000082783 135 ntBASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.16□□□□□ -2.38
Trav6d-4Q5R1I0 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.38
Trav6d-4Q5R1I0 Gm24555-201ENSMUST00000104548 124 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm25787-201ENSMUST00000104709 92 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm12102-201ENSMUST00000118251 604 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm25059-201ENSMUST00000157367 117 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm23586-201ENSMUST00000157657 123 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm24772-201ENSMUST00000158507 110 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm42719-201ENSMUST00000197393 355 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm44396-201ENSMUST00000199843 114 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm45616-201ENSMUST00000211711 319 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm45704-201ENSMUST00000212582 403 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm22972-201ENSMUST00000083297 131 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm24261-201ENSMUST00000083744 104 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 Gm23733-201ENSMUST00000083750 106 ntBASIC0.15□□□□□ -2.39
Trav6d-4Q5R1I0 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.14□□□□□ -2.39
Trav6d-4Q5R1I0 Gm14364-201ENSMUST00000129209 267 ntBASIC0.14□□□□□ -2.39
Trav6d-4Q5R1I0 Gm27289-201ENSMUST00000183341 82 ntBASIC0.14□□□□□ -2.39
Trav6d-4Q5R1I0 Gm10297-201ENSMUST00000207136 651 ntBASIC0.14□□□□□ -2.39
Trav6d-4Q5R1I0 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC0.14□□□□□ -2.39
Trav6d-4Q5R1I0 Gm17911-201ENSMUST00000210806 877 ntBASIC0.14□□□□□ -2.39
Trav6d-4Q5R1I0 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
Trav6d-4Q5R1I0 Gm26326-201ENSMUST00000083070 129 ntBASIC0.14□□□□□ -2.39
Trav6d-4Q5R1I0 Gm26377-201ENSMUST00000102184 108 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Gm14913-201ENSMUST00000120011 1093 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Gm22221-201ENSMUST00000157362 103 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Gm23317-201ENSMUST00000157999 129 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Gm25371-201ENSMUST00000158162 101 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Rnu7-201ENSMUST00000158458 62 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Gm25718-201ENSMUST00000158632 118 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Gm2962-201ENSMUST00000159266 336 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Mir15a-201ENSMUST00000175266 84 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Gm26378-201ENSMUST00000179093 107 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Gm44491-201ENSMUST00000196794 96 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Gm43914-201ENSMUST00000203592 594 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Gm23645-201ENSMUST00000083228 108 ntBASIC0.13□□□□□ -2.39
Trav6d-4Q5R1I0 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 Gm14355-201ENSMUST00000117352 264 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 Gm11219-201ENSMUST00000118565 358 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 Gm12806-201ENSMUST00000119384 268 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 Gm14713-201ENSMUST00000122362 686 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms