Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm19901-201ENSMUST00000192191 495 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Gm23370-201ENSMUST00000199545 130 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Gm10092-201ENSMUST00000077110 180 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Gm26108-201ENSMUST00000083973 191 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Gm22834-201ENSMUST00000102021 79 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Gm25759-201ENSMUST00000103988 129 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Gm11389-201ENSMUST00000121407 430 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Gm24632-201ENSMUST00000122770 323 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Gm24577-201ENSMUST00000158580 63 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Gm23208-201ENSMUST00000158666 127 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Gm35736-201ENSMUST00000203681 313 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Gm19441-201ENSMUST00000221545 330 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Gm24536-201ENSMUST00000083144 107 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Trav3-3Q5R1C3 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Gm11471-201ENSMUST00000121824 198 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Gm25279-201ENSMUST00000122608 133 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Gm23390-201ENSMUST00000157393 106 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Traj60-201ENSMUST00000167781 54 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Gm44844-201ENSMUST00000207242 336 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Gm21937-201ENSMUST00000222825 218 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Gm26066-201ENSMUST00000083385 109 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Mir322-201ENSMUST00000083484 95 ntBASIC1.09□□□□□ -2.23
Trav3-3Q5R1C3 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.09□□□□□ -2.24
Trav3-3Q5R1C3 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Gm12255-201ENSMUST00000117184 284 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Gm13433-201ENSMUST00000121701 240 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Gm25543-201ENSMUST00000122678 312 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Gm26024-201ENSMUST00000158657 322 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Gm24366-201ENSMUST00000175383 86 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Gm18588-201ENSMUST00000177308 492 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Gm23963-201ENSMUST00000179603 77 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Trbv7-201ENSMUST00000193339 402 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Gm5034-201ENSMUST00000199115 634 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Gm18113-201ENSMUST00000220630 303 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Gm22723-201ENSMUST00000083820 129 ntBASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav3-3Q5R1C3 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Gm24068-201ENSMUST00000104513 132 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Gm23535-201ENSMUST00000157542 106 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Gm24668-201ENSMUST00000158935 104 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Gm26435-201ENSMUST00000179026 107 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Gm27957-201ENSMUST00000184054 127 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Mir6352-201ENSMUST00000184495 116 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Gm28648-201ENSMUST00000190092 343 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Gm5001-201ENSMUST00000204361 331 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Gm45456-201ENSMUST00000210841 243 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Gm26314-201ENSMUST00000083891 107 ntBASIC1.07□□□□□ -2.24
Trav3-3Q5R1C3 Gm24865-201ENSMUST00000103246 96 ntBASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Gm8121-201ENSMUST00000153583 499 ntBASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Gm26181-201ENSMUST00000157687 106 ntBASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Gm24409-201ENSMUST00000157881 152 ntBASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Gm22841-201ENSMUST00000158443 62 ntBASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Gm22663-201ENSMUST00000158721 102 ntBASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Gm45815-201ENSMUST00000220241 146 ntBASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trav3-3Q5R1C3 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms