Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm20874-201ENSMUST00000178356 663 ntBASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 Gm18113-201ENSMUST00000220630 303 ntBASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 Gm23515-201ENSMUST00000082829 107 ntBASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 Gm23097-201ENSMUST00000083448 105 ntBASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
Trav8d-2Q5R1B6 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Gm14293-201ENSMUST00000118528 577 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Gm12351-201ENSMUST00000118727 292 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Gm22985-201ENSMUST00000122754 116 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Gm27510-201ENSMUST00000158214 64 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Gm23858-201ENSMUST00000158384 106 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Gm24084-201ENSMUST00000175173 137 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Mir1954-201ENSMUST00000175595 86 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Gm19932-201ENSMUST00000177033 313 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Gm9830-201ENSMUST00000178509 357 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Gm42960-201ENSMUST00000202160 241 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Gm18696-201ENSMUST00000220103 274 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 Mir200b-201ENSMUST00000083615 70 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Trav8d-2Q5R1B6 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm13720-201ENSMUST00000120741 196 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm23328-201ENSMUST00000157418 132 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm22217-201ENSMUST00000157556 313 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm22768-201ENSMUST00000158366 153 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Snord87-201ENSMUST00000175437 87 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm22308-201ENSMUST00000177609 107 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm26335-201ENSMUST00000178449 107 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm27511-201ENSMUST00000183502 127 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Mir7683-201ENSMUST00000183842 61 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm27493-201ENSMUST00000184128 78 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm18357-201ENSMUST00000188184 580 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm18775-201ENSMUST00000190763 586 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Mir3961-201ENSMUST00000198795 59 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm5001-201ENSMUST00000204361 331 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm24623-201ENSMUST00000082616 194 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm24624-201ENSMUST00000082617 164 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.44□□□□□ -2.18
Trav8d-2Q5R1B6 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm15529-201ENSMUST00000121833 994 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm23760-201ENSMUST00000158350 116 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm18588-201ENSMUST00000177308 492 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm21737-201ENSMUST00000178112 664 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm21729-201ENSMUST00000180058 664 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm21853-201ENSMUST00000180071 664 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm20901-201ENSMUST00000180177 664 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm27656-201ENSMUST00000185055 80 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm29495-201ENSMUST00000189319 664 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm28090-201ENSMUST00000189458 664 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm21647-201ENSMUST00000189755 664 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm28506-201ENSMUST00000189937 150 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Gm25896-201ENSMUST00000083713 136 ntBASIC1.43□□□□□ -2.18
Trav8d-2Q5R1B6 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm22780-201ENSMUST00000104084 132 ntBASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm24984-201ENSMUST00000104454 133 ntBASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm24598-201ENSMUST00000122510 74 ntBASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm23557-201ENSMUST00000157820 138 ntBASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm24409-201ENSMUST00000157881 152 ntBASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm20613-201ENSMUST00000175828 345 ntBASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Mir6394-201ENSMUST00000184738 99 ntBASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm44655-201ENSMUST00000207768 423 ntBASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm45315-201ENSMUST00000209283 333 ntBASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm24150-201ENSMUST00000082759 104 ntBASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.42□□□□□ -2.18
Trav8d-2Q5R1B6 Mir873a-201ENSMUST00000104863 77 ntBASIC1.41□□□□□ -2.18
Trav8d-2Q5R1B6 Gm14355-201ENSMUST00000117352 264 ntBASIC1.41□□□□□ -2.18
Trav8d-2Q5R1B6 Gm14709-201ENSMUST00000121225 304 ntBASIC1.41□□□□□ -2.18
Trav8d-2Q5R1B6 Gm14678-201ENSMUST00000121396 482 ntBASIC1.41□□□□□ -2.18
Trav8d-2Q5R1B6 Gm14972-201ENSMUST00000121780 364 ntBASIC1.41□□□□□ -2.18
Trav8d-2Q5R1B6 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.41□□□□□ -2.18
Trav8d-2Q5R1B6 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 164.5 ms