Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm45673-201ENSMUST00000210293 358 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 AC154527.5-201ENSMUST00000224448 496 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm22978-201ENSMUST00000082607 160 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm26126-201ENSMUST00000083188 164 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Mir300-201ENSMUST00000083485 79 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm23472-201ENSMUST00000101806 191 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm11254-201ENSMUST00000122368 653 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm24053-201ENSMUST00000158620 105 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm24497-201ENSMUST00000177868 191 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm25939-201ENSMUST00000179876 191 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm22263-201ENSMUST00000180060 104 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Mir7016-201ENSMUST00000184308 72 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm27369-201ENSMUST00000185182 71 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm28257-201ENSMUST00000185244 463 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm29005-201ENSMUST00000186773 320 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm44063-201ENSMUST00000203307 376 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm25788-201ENSMUST00000082721 131 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm23444-201ENSMUST00000082922 191 ntBASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.91□□□□□ -2.1
Trim40Q3UWA4 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm25407-201ENSMUST00000104102 134 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm24122-201ENSMUST00000104107 132 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm24984-201ENSMUST00000104454 133 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm12793-201ENSMUST00000119268 292 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm14678-201ENSMUST00000121396 482 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm24348-201ENSMUST00000158710 130 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm23342-201ENSMUST00000158958 115 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm24816-201ENSMUST00000175311 151 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm43676-201ENSMUST00000197532 540 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm6796-201ENSMUST00000211919 243 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm25589-201ENSMUST00000082502 166 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm23412-201ENSMUST00000083017 107 ntBASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.9□□□□□ -2.11
Trim40Q3UWA4 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Mir669l-201ENSMUST00000103771 98 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Mir872-201ENSMUST00000104728 81 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Gm26249-201ENSMUST00000116708 118 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Gm22713-201ENSMUST00000116895 130 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Gm23262-201ENSMUST00000158323 168 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Gm27722-201ENSMUST00000183908 76 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Mir6950-201ENSMUST00000184438 73 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Mir7047-201ENSMUST00000184595 64 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Gm28288-201ENSMUST00000191019 214 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.89□□□□□ -2.11
Trim40Q3UWA4 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.89□□□□□ -2.11
Trim40Q3UWA4 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Mir127-201ENSMUST00000093568 70 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Gm24817-201ENSMUST00000093672 105 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Gm26329-201ENSMUST00000093723 110 ntBASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim40Q3UWA4 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trim40Q3UWA4 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm25059-201ENSMUST00000157367 117 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm24480-201ENSMUST00000157442 103 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm22447-201ENSMUST00000158155 92 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm22434-201ENSMUST00000158549 122 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm22945-201ENSMUST00000158557 157 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm25711-201ENSMUST00000158633 128 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm27640-201ENSMUST00000184580 147 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm44468-201ENSMUST00000199516 105 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm44419-201ENSMUST00000203338 229 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.88□□□□□ -2.11
Trim40Q3UWA4 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm26111-201ENSMUST00000083969 106 ntBASIC1.88□□□□□ -2.11
Trim40Q3UWA4 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Gm23175-201ENSMUST00000104371 132 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Gm14803-201ENSMUST00000117163 361 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 U6.1-201ENSMUST00000157443 101 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Gm22598-201ENSMUST00000157600 127 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Gm17161-201ENSMUST00000169187 524 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Gm24799-201ENSMUST00000178431 79 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Mir6916-201ENSMUST00000184514 63 ntBASIC1.87□□□□□ -2.11
Trim40Q3UWA4 Gm28016-201ENSMUST00000184594 196 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms