Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Rnf180Q3U827 Gm13992-201ENSMUST00000120558 156 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 Gm12443-201ENSMUST00000122308 323 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 Gm25269-201ENSMUST00000122601 104 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 Gm25543-201ENSMUST00000122678 312 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 Gm25069-201ENSMUST00000175238 86 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 Gm27803-201ENSMUST00000183763 119 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 Mir7225-201ENSMUST00000184178 54 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 Gm44887-201ENSMUST00000208980 178 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 Gm7065-201ENSMUST00000222150 474 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 Gm26327-201ENSMUST00000093724 111 ntBASIC3.4□□□□□ -1.87
Rnf180Q3U827 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm23836-201ENSMUST00000104434 129 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm24683-201ENSMUST00000104840 88 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm23841-201ENSMUST00000116951 114 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm11253-201ENSMUST00000118486 201 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm14069-201ENSMUST00000120815 229 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm22026-201ENSMUST00000122735 281 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm23892-201ENSMUST00000158105 130 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm24056-201ENSMUST00000158617 146 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Mir6370-201ENSMUST00000183510 120 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm27796-201ENSMUST00000183863 261 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm5329-201ENSMUST00000186898 463 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Rnf180Q3U827 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm22443-201ENSMUST00000082890 107 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 AF357341-201ENSMUST00000083088 75 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm22169-201ENSMUST00000083229 107 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm22294-201ENSMUST00000083308 104 ntBASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Rnf180Q3U827 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Rnf180Q3U827 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.38□□□□□ -1.87
Rnf180Q3U827 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Rnf180Q3U827 Gm22270-201ENSMUST00000104034 132 ntBASIC3.38□□□□□ -1.87
Rnf180Q3U827 Gm25664-201ENSMUST00000157697 107 ntBASIC3.38□□□□□ -1.87
Rnf180Q3U827 Gm22527-201ENSMUST00000158816 106 ntBASIC3.38□□□□□ -1.87
Rnf180Q3U827 Gm27470-201ENSMUST00000184070 210 ntBASIC3.38□□□□□ -1.87
Rnf180Q3U827 Gm28627-201ENSMUST00000186141 453 ntBASIC3.38□□□□□ -1.87
Rnf180Q3U827 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC3.38□□□□□ -1.87
Rnf180Q3U827 Gm25130-201ENSMUST00000082650 156 ntBASIC3.38□□□□□ -1.87
Rnf180Q3U827 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Rnf180Q3U827 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Rnf180Q3U827 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm25421-201ENSMUST00000104218 164 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 Mdga2-203ENSMUST00000113942 423 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm22027-201ENSMUST00000122737 127 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm24716-201ENSMUST00000157524 104 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm22316-201ENSMUST00000158012 216 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm23545-201ENSMUST00000158205 104 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm27582-201ENSMUST00000184084 126 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm20058-201ENSMUST00000186939 284 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm29657-201ENSMUST00000189807 342 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm37428-201ENSMUST00000193886 137 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm24356-201ENSMUST00000082859 106 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 Mir184-201ENSMUST00000083662 69 ntBASIC3.37□□□□□ -1.87
Rnf180Q3U827 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Rnf180Q3U827 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Rnf180Q3U827 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Rnf180Q3U827 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Rnf180Q3U827 Gm25466-201ENSMUST00000103995 132 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 Mir344e-201ENSMUST00000104677 66 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 Mir466h-201ENSMUST00000104748 81 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 Gm23988-201ENSMUST00000117034 122 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 Gm6574-201ENSMUST00000120037 362 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 Gm12155-201ENSMUST00000121267 160 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 Gm23183-201ENSMUST00000122595 323 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 Gm23980-201ENSMUST00000157135 158 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 Gm23640-201ENSMUST00000157860 104 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 Gm23548-201ENSMUST00000158963 106 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 Mir5123-201ENSMUST00000177794 83 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 Gm22911-201ENSMUST00000177920 107 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Rnf180Q3U827 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.36□□□□□ -1.87
Rnf180Q3U827 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Rnf180Q3U827 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Rnf180Q3U827 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Rnf180Q3U827 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Rnf180Q3U827 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Mir541-201ENSMUST00000102097 90 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 520.6 ms