Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm5967-201ENSMUST00000172723 494 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Gm20450-201ENSMUST00000173652 147 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Mir6383-201ENSMUST00000184545 116 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Gm29658-201ENSMUST00000185404 230 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Gm5002-201ENSMUST00000207145 223 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Gm18188-201ENSMUST00000219386 478 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Gm46993-201ENSMUST00000220708 259 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Gm26458-201ENSMUST00000082832 128 ntBASIC2.64□□□□□ -1.99
Col28a1Q2UY11 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm14782-201ENSMUST00000120151 195 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm24443-201ENSMUST00000157242 132 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm22651-201ENSMUST00000157872 94 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm25863-201ENSMUST00000158249 329 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm23053-201ENSMUST00000175136 96 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm24308-201ENSMUST00000177773 114 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm23571-201ENSMUST00000180073 127 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm27851-201ENSMUST00000183529 63 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm37361-201ENSMUST00000194345 132 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm19563-201ENSMUST00000222031 270 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm26454-201ENSMUST00000082682 107 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm25651-201ENSMUST00000083782 119 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col28a1Q2UY11 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.63□□□□□ -1.99
Col28a1Q2UY11 Gm24116-201ENSMUST00000103975 107 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm24122-201ENSMUST00000104107 132 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm6829-201ENSMUST00000119858 360 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm22026-201ENSMUST00000122735 281 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm25391-201ENSMUST00000157342 134 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm22141-201ENSMUST00000157403 277 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm24997-201ENSMUST00000157910 105 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm24681-201ENSMUST00000158760 107 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm17166-201ENSMUST00000172006 431 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Mir465d-201ENSMUST00000196314 58 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm44519-201ENSMUST00000206486 122 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm44657-201ENSMUST00000208568 450 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm45907-201ENSMUST00000213023 193 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Col28a1Q2UY11 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm4945-201ENSMUST00000075152 453 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm24152-201ENSMUST00000082764 163 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col28a1Q2UY11 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.62□□□□□ -1.99
Col28a1Q2UY11 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Col28a1Q2UY11 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm23472-201ENSMUST00000101806 191 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm24132-201ENSMUST00000104745 91 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm13992-201ENSMUST00000120558 156 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm25115-201ENSMUST00000157187 140 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm23586-201ENSMUST00000157657 123 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm25615-201ENSMUST00000177836 94 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm24497-201ENSMUST00000177868 191 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm23963-201ENSMUST00000179603 77 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm29597-201ENSMUST00000188035 308 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Trbv7-201ENSMUST00000193339 402 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.61□□□□□ -1.99
Col28a1Q2UY11 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm44526-201ENSMUST00000204664 121 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm18213-201ENSMUST00000207850 178 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm6796-201ENSMUST00000211919 243 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm23444-201ENSMUST00000082922 191 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm22970-201ENSMUST00000083304 186 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
Col28a1Q2UY11 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.61□□□□□ -1.99
Col28a1Q2UY11 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Gm23911-201ENSMUST00000104596 134 ntBASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Gm23990-201ENSMUST00000117031 117 ntBASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Gm14922-201ENSMUST00000121131 163 ntBASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Gm28627-201ENSMUST00000186141 453 ntBASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Gm43749-201ENSMUST00000199345 352 ntBASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Gm36189-201ENSMUST00000204113 523 ntBASIC2.6□□□□□ -1.99
Col28a1Q2UY11 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.6□□□□□ -1.99
Col28a1Q2UY11 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Gm26166-201ENSMUST00000083788 107 ntBASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms