Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm22246-201ENSMUST00000082478 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm22747-201ENSMUST00000082495 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm22063-201ENSMUST00000082560 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm23057-201ENSMUST00000082801 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm26328-201ENSMUST00000082821 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm26331-201ENSMUST00000082824 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm24205-201ENSMUST00000082953 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm25405-201ENSMUST00000082973 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm26324-201ENSMUST00000083073 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm26496-201ENSMUST00000083150 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm26127-201ENSMUST00000083193 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm24456-201ENSMUST00000083198 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm24458-201ENSMUST00000083204 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm24018-201ENSMUST00000083232 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm25794-201ENSMUST00000083286 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm25790-201ENSMUST00000083293 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm22295-201ENSMUST00000083311 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm25127-201ENSMUST00000083336 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm25583-201ENSMUST00000083413 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm25577-201ENSMUST00000083414 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm24414-201ENSMUST00000083434 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm24861-201ENSMUST00000083459 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm24803-201ENSMUST00000083693 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm23103-201ENSMUST00000083725 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm22580-201ENSMUST00000083727 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm24260-201ENSMUST00000083741 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm23732-201ENSMUST00000083751 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm22682-201ENSMUST00000083854 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm25869-201ENSMUST00000083855 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm24693-201ENSMUST00000083885 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm26317-201ENSMUST00000083894 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm24448-201ENSMUST00000083979 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm22798-201ENSMUST00000083992 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm26427-201ENSMUST00000093648 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm22886-201ENSMUST00000093714 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm22170-201ENSMUST00000097247 107 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col17a1Q07563 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4□□□□□ -1.77
Col17a1Q07563 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.99□□□□□ -1.77
Col17a1Q07563 Gm24234-201ENSMUST00000104316 107 ntBASIC3.99□□□□□ -1.77
Col17a1Q07563 Gm14657-201ENSMUST00000117461 302 ntBASIC3.99□□□□□ -1.77
Col17a1Q07563 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.99□□□□□ -1.77
Col17a1Q07563 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.99□□□□□ -1.77
Col17a1Q07563 Gm24394-201ENSMUST00000158141 123 ntBASIC3.99□□□□□ -1.77
Col17a1Q07563 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.99□□□□□ -1.77
Col17a1Q07563 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.99□□□□□ -1.77
Col17a1Q07563 Gm23264-201ENSMUST00000083372 107 ntBASIC3.99□□□□□ -1.77
Col17a1Q07563 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col17a1Q07563 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.99□□□□□ -1.77
Col17a1Q07563 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col17a1Q07563 Gm25496-201ENSMUST00000104430 120 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Snord19-201ENSMUST00000104609 76 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm24594-201ENSMUST00000122502 99 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm24392-201ENSMUST00000158136 103 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm25015-201ENSMUST00000158400 128 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm25716-201ENSMUST00000158628 104 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm24667-201ENSMUST00000158938 103 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm16162-201ENSMUST00000162296 297 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Mir195b-201ENSMUST00000184814 97 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm7182-201ENSMUST00000193351 732 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col17a1Q07563 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Col17a1Q07563 Mir701-201ENSMUST00000102208 109 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm12797-201ENSMUST00000118645 273 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm12495-201ENSMUST00000119750 447 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm26026-201ENSMUST00000122726 123 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm23642-201ENSMUST00000157858 258 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm22118-201ENSMUST00000175593 171 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm24168-201ENSMUST00000178825 107 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm37162-201ENSMUST00000191708 551 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm37763-201ENSMUST00000193445 120 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm43583-201ENSMUST00000199235 303 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm44520-201ENSMUST00000205447 802 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm23625-201ENSMUST00000082457 100 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm23140-201ENSMUST00000082487 107 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Mir222-201ENSMUST00000083537 79 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm22723-201ENSMUST00000083820 129 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Snora2b-201ENSMUST00000084005 137 ntBASIC3.98□□□□□ -1.77
Col17a1Q07563 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col17a1Q07563 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.97□□□□□ -1.77
Col17a1Q07563 Gm23651-201ENSMUST00000116755 120 ntBASIC3.97□□□□□ -1.77
Col17a1Q07563 Gm15029-201ENSMUST00000119742 199 ntBASIC3.97□□□□□ -1.77
Col17a1Q07563 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC3.97□□□□□ -1.77
Col17a1Q07563 Gm22766-201ENSMUST00000158372 99 ntBASIC3.97□□□□□ -1.77
Col17a1Q07563 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.97□□□□□ -1.77
Col17a1Q07563 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.97□□□□□ -1.77
Col17a1Q07563 Gm24487-201ENSMUST00000178017 63 ntBASIC3.97□□□□□ -1.77
Col17a1Q07563 Gm37693-201ENSMUST00000194562 234 ntBASIC3.97□□□□□ -1.77
Col17a1Q07563 Gm46194-201ENSMUST00000218136 320 ntBASIC3.97□□□□□ -1.77
Col17a1Q07563 Gm26446-201ENSMUST00000082455 103 ntBASIC3.97□□□□□ -1.77
Col17a1Q07563 Mir302d-201ENSMUST00000083513 66 ntBASIC3.97□□□□□ -1.77
Col17a1Q07563 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
Col17a1Q07563 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.96□□□□□ -1.77
Col17a1Q07563 Gm14868-201ENSMUST00000117840 216 ntBASIC3.96□□□□□ -1.78
Col17a1Q07563 Gm11572-201ENSMUST00000119164 120 ntBASIC3.96□□□□□ -1.78
Col17a1Q07563 Gm43676-201ENSMUST00000197532 540 ntBASIC3.96□□□□□ -1.78
Col17a1Q07563 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.96□□□□□ -1.78
Col17a1Q07563 Gm43407-201ENSMUST00000199816 317 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 206.9 ms