Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.23□□□□□ -1.89
Sox9Q04887 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.23□□□□□ -1.89
Sox9Q04887 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Sox9Q04887 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.23□□□□□ -1.89
Sox9Q04887 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Sox9Q04887 Gm23472-201ENSMUST00000101806 191 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm26342-201ENSMUST00000104557 129 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm22141-201ENSMUST00000157403 277 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm24846-201ENSMUST00000158033 108 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.22□□□□□ -1.89
Sox9Q04887 Gm22853-201ENSMUST00000174974 131 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm24497-201ENSMUST00000177868 191 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm28627-201ENSMUST00000186141 453 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm29167-201ENSMUST00000190024 377 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm43220-201ENSMUST00000199299 282 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm24966-201ENSMUST00000082443 79 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm25930-201ENSMUST00000082785 107 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm23444-201ENSMUST00000082922 191 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm24204-201ENSMUST00000082950 107 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.22□□□□□ -1.89
Sox9Q04887 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Sox9Q04887 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Sox9Q04887 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Sox9Q04887 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.22□□□□□ -1.89
Sox9Q04887 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Sox9Q04887 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.22□□□□□ -1.89
Sox9Q04887 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Sox9Q04887 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Sox9Q04887 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.21□□□□□ -1.9
Sox9Q04887 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Sox9Q04887 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Sox9Q04887 Gm25015-201ENSMUST00000158400 128 ntBASIC3.21□□□□□ -1.9
Sox9Q04887 Gm24878-201ENSMUST00000158782 104 ntBASIC3.21□□□□□ -1.9
Sox9Q04887 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Sox9Q04887 Mir3076-201ENSMUST00000175415 60 ntBASIC3.21□□□□□ -1.9
Sox9Q04887 Gm5224-201ENSMUST00000183060 350 ntBASIC3.21□□□□□ -1.9
Sox9Q04887 Gm27928-201ENSMUST00000183747 256 ntBASIC3.21□□□□□ -1.9
Sox9Q04887 Gm27761-201ENSMUST00000184091 131 ntBASIC3.21□□□□□ -1.9
Sox9Q04887 Gm29602-201ENSMUST00000186887 442 ntBASIC3.21□□□□□ -1.9
Sox9Q04887 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.21□□□□□ -1.9
Sox9Q04887 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.21□□□□□ -1.9
Sox9Q04887 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Sox9Q04887 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Sox9Q04887 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
Sox9Q04887 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Sox9Q04887 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Sox9Q04887 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Sox9Q04887 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sox9Q04887 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sox9Q04887 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sox9Q04887 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Sox9Q04887 Gm23011-201ENSMUST00000104148 132 ntBASIC3.2□□□□□ -1.9
Sox9Q04887 Gm23202-201ENSMUST00000104376 129 ntBASIC3.2□□□□□ -1.9
Sox9Q04887 Snord19-201ENSMUST00000104609 76 ntBASIC3.2□□□□□ -1.9
Sox9Q04887 Gm25153-201ENSMUST00000157118 156 ntBASIC3.2□□□□□ -1.9
Sox9Q04887 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Sox9Q04887 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.2□□□□□ -1.9
Sox9Q04887 Gm44308-201ENSMUST00000197080 99 ntBASIC3.2□□□□□ -1.9
Sox9Q04887 Gm42774-201ENSMUST00000198854 283 ntBASIC3.2□□□□□ -1.9
Sox9Q04887 Gm45452-201ENSMUST00000210905 177 ntBASIC3.2□□□□□ -1.9
Sox9Q04887 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.2□□□□□ -1.9
Sox9Q04887 Gm23039-201ENSMUST00000083870 161 ntBASIC3.2□□□□□ -1.9
Sox9Q04887 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sox9Q04887 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sox9Q04887 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sox9Q04887 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sox9Q04887 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sox9Q04887 Gm25421-201ENSMUST00000104218 164 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Gm14073-201ENSMUST00000117344 381 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Gm15497-201ENSMUST00000119137 551 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Gm11204-201ENSMUST00000122438 147 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Gm15733-201ENSMUST00000132957 242 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Gm16533-201ENSMUST00000140035 228 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Gm23588-201ENSMUST00000157659 99 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Gm26061-201ENSMUST00000175584 108 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Gm22286-201ENSMUST00000179708 107 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sox9Q04887 Gm44459-201ENSMUST00000203926 160 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Sox9Q04887 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sox9Q04887 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.19□□□□□ -1.9
Sox9Q04887 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.18□□□□□ -1.9
Sox9Q04887 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Sox9Q04887 Gm14215-201ENSMUST00000120578 221 ntBASIC3.18□□□□□ -1.9
Sox9Q04887 Gm24892-201ENSMUST00000122747 104 ntBASIC3.18□□□□□ -1.9
Sox9Q04887 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.18□□□□□ -1.9
Sox9Q04887 Gm22227-201ENSMUST00000157356 259 ntBASIC3.18□□□□□ -1.9
Sox9Q04887 Gm22192-201ENSMUST00000175128 85 ntBASIC3.18□□□□□ -1.9
Sox9Q04887 Gm17067-202ENSMUST00000180131 123 ntBASIC3.18□□□□□ -1.9
Sox9Q04887 Gm6060-201ENSMUST00000188671 251 ntBASIC3.18□□□□□ -1.9
Sox9Q04887 Mir378a-201ENSMUST00000198300 66 ntBASIC3.18□□□□□ -1.9
Sox9Q04887 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.18□□□□□ -1.9
Sox9Q04887 Gm22978-201ENSMUST00000082607 160 ntBASIC3.18□□□□□ -1.9
Sox9Q04887 Gm25632-201ENSMUST00000083112 85 ntBASIC3.18□□□□□ -1.9
Sox9Q04887 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Sox9Q04887 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Sox9Q04887 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms