Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Mir3965-201ENSMUST00000175570 69 ntBASIC3.68□□□□□ -1.82
Col6a1Q04857 Mir6905-201ENSMUST00000184228 70 ntBASIC3.68□□□□□ -1.82
Col6a1Q04857 Gm38356-201ENSMUST00000194313 408 ntBASIC3.68□□□□□ -1.82
Col6a1Q04857 Gm19563-201ENSMUST00000222031 270 ntBASIC3.68□□□□□ -1.82
Col6a1Q04857 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.68□□□□□ -1.82
Col6a1Q04857 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Col6a1Q04857 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col6a1Q04857 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col6a1Q04857 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col6a1Q04857 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col6a1Q04857 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a1Q04857 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Col6a1Q04857 Gm22148-201ENSMUST00000104445 107 ntBASIC3.67□□□□□ -1.82
Col6a1Q04857 Mir291a-201ENSMUST00000104815 82 ntBASIC3.67□□□□□ -1.82
Col6a1Q04857 Gm13922-201ENSMUST00000119505 156 ntBASIC3.67□□□□□ -1.82
Col6a1Q04857 Gm22322-201ENSMUST00000157151 111 ntBASIC3.67□□□□□ -1.82
Col6a1Q04857 Mir5127-201ENSMUST00000175295 71 ntBASIC3.67□□□□□ -1.82
Col6a1Q04857 Mir6371-201ENSMUST00000184470 111 ntBASIC3.67□□□□□ -1.82
Col6a1Q04857 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Col6a1Q04857 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.67□□□□□ -1.82
Col6a1Q04857 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a1Q04857 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Col6a1Q04857 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Col6a1Q04857 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col6a1Q04857 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a1Q04857 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a1Q04857 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a1Q04857 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a1Q04857 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col6a1Q04857 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 Gm25961-201ENSMUST00000157174 135 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 Gm22349-201ENSMUST00000157864 107 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 Gm22966-201ENSMUST00000157957 129 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 Gm27921-201ENSMUST00000183968 108 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 Gm43563-201ENSMUST00000196761 198 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 Gm18000-201ENSMUST00000212153 800 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 Gm46233-201ENSMUST00000217831 449 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 Gm10298-201ENSMUST00000074801 265 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 Mir208a-201ENSMUST00000083498 83 ntBASIC3.66□□□□□ -1.82
Col6a1Q04857 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a1Q04857 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a1Q04857 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col6a1Q04857 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col6a1Q04857 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col6a1Q04857 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col6a1Q04857 Mir1198-201ENSMUST00000116995 121 ntBASIC3.65□□□□□ -1.83
Col6a1Q04857 Gm22051-201ENSMUST00000117002 127 ntBASIC3.65□□□□□ -1.83
Col6a1Q04857 Gm24958-201ENSMUST00000158009 97 ntBASIC3.65□□□□□ -1.83
Col6a1Q04857 Gm22139-201ENSMUST00000158747 105 ntBASIC3.65□□□□□ -1.83
Col6a1Q04857 Gm44352-201ENSMUST00000196358 110 ntBASIC3.65□□□□□ -1.83
Col6a1Q04857 Gm33866-201ENSMUST00000196911 289 ntBASIC3.65□□□□□ -1.83
Col6a1Q04857 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.65□□□□□ -1.83
Col6a1Q04857 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.65□□□□□ -1.83
Col6a1Q04857 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.65□□□□□ -1.83
Col6a1Q04857 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.65□□□□□ -1.83
Col6a1Q04857 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.65□□□□□ -1.83
Col6a1Q04857 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col6a1Q04857 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col6a1Q04857 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col6a1Q04857 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col6a1Q04857 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a1Q04857 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col6a1Q04857 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.64□□□□□ -1.83
Col6a1Q04857 Gm22939-201ENSMUST00000103958 131 ntBASIC3.64□□□□□ -1.83
Col6a1Q04857 Gm14020-201ENSMUST00000118165 662 ntBASIC3.64□□□□□ -1.83
Col6a1Q04857 Gm25267-201ENSMUST00000158522 63 ntBASIC3.64□□□□□ -1.83
Col6a1Q04857 Gm25457-201ENSMUST00000179509 107 ntBASIC3.64□□□□□ -1.83
Col6a1Q04857 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.64□□□□□ -1.83
Col6a1Q04857 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.64□□□□□ -1.83
Col6a1Q04857 Gm18502-201ENSMUST00000218679 199 ntBASIC3.64□□□□□ -1.83
Col6a1Q04857 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.64□□□□□ -1.83
Col6a1Q04857 Snord7-201ENSMUST00000083781 97 ntBASIC3.64□□□□□ -1.83
Col6a1Q04857 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Col6a1Q04857 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.64□□□□□ -1.83
Col6a1Q04857 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a1Q04857 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a1Q04857 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Col6a1Q04857 Gm12858-201ENSMUST00000121913 208 ntBASIC3.63□□□□□ -1.83
Col6a1Q04857 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.63□□□□□ -1.83
Col6a1Q04857 Gm44524-201ENSMUST00000203899 271 ntBASIC3.63□□□□□ -1.83
Col6a1Q04857 Gm39147-201ENSMUST00000211376 465 ntBASIC3.63□□□□□ -1.83
Col6a1Q04857 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.63□□□□□ -1.83
Col6a1Q04857 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a1Q04857 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.63□□□□□ -1.83
Col6a1Q04857 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col6a1Q04857 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Col6a1Q04857 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a1Q04857 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a1Q04857 Mir767-201ENSMUST00000103256 107 ntBASIC3.62□□□□□ -1.83
Col6a1Q04857 Gm12449-201ENSMUST00000117572 234 ntBASIC3.62□□□□□ -1.83
Col6a1Q04857 Gm23589-201ENSMUST00000157660 105 ntBASIC3.62□□□□□ -1.83
Col6a1Q04857 Gm26403-201ENSMUST00000158500 105 ntBASIC3.62□□□□□ -1.83
Col6a1Q04857 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.62□□□□□ -1.83
Col6a1Q04857 Gm17113-201ENSMUST00000170118 171 ntBASIC3.62□□□□□ -1.83
Col6a1Q04857 Gm44399-201ENSMUST00000205043 226 ntBASIC3.62□□□□□ -1.83
Col6a1Q04857 Gm45116-201ENSMUST00000207392 275 ntBASIC3.62□□□□□ -1.83
Col6a1Q04857 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.62□□□□□ -1.83
Col6a1Q04857 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms