Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Mir29c-201ENSMUST00000083614 88 ntBASIC1.08□□□□□ -2.24
Nkx3-1P97436 Gm26249-201ENSMUST00000116708 118 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm27510-201ENSMUST00000158214 64 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm21978-201ENSMUST00000179696 377 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm23523-201ENSMUST00000180190 107 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm27385-201ENSMUST00000184747 104 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm27919-201ENSMUST00000185163 107 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.07□□□□□ -2.24
Nkx3-1P97436 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm42834-201ENSMUST00000196845 256 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm42807-201ENSMUST00000200141 329 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC1.07□□□□□ -2.24
Nkx3-1P97436 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.07□□□□□ -2.24
Nkx3-1P97436 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm22997-201ENSMUST00000082845 107 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Gm26108-201ENSMUST00000083973 191 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Mir452-201ENSMUST00000093629 85 ntBASIC1.07□□□□□ -2.24
Nkx3-1P97436 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm22003-201ENSMUST00000101885 107 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Nkx3-1P97436 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm15529-201ENSMUST00000121833 994 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm25269-201ENSMUST00000122601 104 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm25768-201ENSMUST00000158570 98 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm22129-201ENSMUST00000179034 107 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm23410-201ENSMUST00000179967 107 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm22756-201ENSMUST00000180118 107 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Mir7039-201ENSMUST00000183852 85 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm27668-201ENSMUST00000184188 120 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Mir7j-201ENSMUST00000184427 122 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm27656-201ENSMUST00000185055 80 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm28597-201ENSMUST00000187664 666 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm2829-201ENSMUST00000213121 499 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm22306-201ENSMUST00000082692 107 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm22505-201ENSMUST00000082956 108 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm22363-201ENSMUST00000083100 108 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm23814-201ENSMUST00000083230 102 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm23095-201ENSMUST00000083446 107 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Mir196b-201ENSMUST00000083509 85 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Mir211-201ENSMUST00000083651 106 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Snord38a-201ENSMUST00000083746 71 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm25207-201ENSMUST00000093745 107 ntBASIC1.06□□□□□ -2.24
Nkx3-1P97436 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Nkx3-1P97436 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Nkx3-1P97436 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Nkx3-1P97436 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm23060-201ENSMUST00000102345 109 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.05□□□□□ -2.24
Nkx3-1P97436 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm24172-201ENSMUST00000104127 117 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm25170-201ENSMUST00000104191 129 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm15365-201ENSMUST00000122392 300 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm23331-201ENSMUST00000157423 108 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.05□□□□□ -2.24
Nkx3-1P97436 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm25035-201ENSMUST00000175414 77 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Mir1954-201ENSMUST00000175595 86 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm18588-201ENSMUST00000177308 492 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm25936-201ENSMUST00000179952 114 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm27711-201ENSMUST00000183802 118 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm27588-201ENSMUST00000185096 263 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm29352-201ENSMUST00000188054 544 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm38261-201ENSMUST00000192608 316 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm37658-201ENSMUST00000192672 315 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.05□□□□□ -2.24
Nkx3-1P97436 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm18188-201ENSMUST00000219386 478 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Mir340-201ENSMUST00000083483 98 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm25409-201ENSMUST00000083764 131 ntBASIC1.05□□□□□ -2.24
Nkx3-1P97436 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Nkx3-1P97436 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
Nkx3-1P97436 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Nkx3-1P97436 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.04□□□□□ -2.24
Nkx3-1P97436 Mir223-201ENSMUST00000102112 110 ntBASIC1.04□□□□□ -2.24
Nkx3-1P97436 Gm24079-201ENSMUST00000104352 132 ntBASIC1.04□□□□□ -2.24
Nkx3-1P97436 Gm25495-201ENSMUST00000104431 131 ntBASIC1.04□□□□□ -2.24
Nkx3-1P97436 Gm23907-201ENSMUST00000104595 189 ntBASIC1.04□□□□□ -2.24
Nkx3-1P97436 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Nkx3-1P97436 Gm14624-201ENSMUST00000117746 192 ntBASIC1.04□□□□□ -2.24
Nkx3-1P97436 Gm14923-201ENSMUST00000118270 155 ntBASIC1.04□□□□□ -2.24
Nkx3-1P97436 Gm22338-201ENSMUST00000157715 129 ntBASIC1.04□□□□□ -2.24
Nkx3-1P97436 Mir3086-201ENSMUST00000175072 87 ntBASIC1.04□□□□□ -2.24
Nkx3-1P97436 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.04□□□□□ -2.24
Nkx3-1P97436 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.04□□□□□ -2.24
Nkx3-1P97436 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.04□□□□□ -2.24
Nkx3-1P97436 Gm43739-201ENSMUST00000198294 307 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms