Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm23641-201ENSMUST00000157857 101 ntBASIC2.31□□□□□ -2.04
NcanP55066 Gm22085-201ENSMUST00000158344 110 ntBASIC2.31□□□□□ -2.04
NcanP55066 Gm22435-201ENSMUST00000158552 128 ntBASIC2.31□□□□□ -2.04
NcanP55066 Gm22527-201ENSMUST00000158816 106 ntBASIC2.31□□□□□ -2.04
NcanP55066 Gm23190-201ENSMUST00000180307 64 ntBASIC2.31□□□□□ -2.04
NcanP55066 Gm28647-201ENSMUST00000188416 197 ntBASIC2.31□□□□□ -2.04
NcanP55066 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.31□□□□□ -2.04
NcanP55066 Gm43286-201ENSMUST00000197420 424 ntBASIC2.31□□□□□ -2.04
NcanP55066 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.31□□□□□ -2.04
NcanP55066 Gm5023-201ENSMUST00000217442 587 ntBASIC2.31□□□□□ -2.04
NcanP55066 Olfr197-201ENSMUST00000080031 926 ntBASIC2.31□□□□□ -2.04
NcanP55066 Snord42a-201ENSMUST00000082606 65 ntBASIC2.31□□□□□ -2.04
NcanP55066 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.31□□□□□ -2.04
NcanP55066 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.31□□□□□ -2.04
NcanP55066 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NcanP55066 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
NcanP55066 Gm15497-201ENSMUST00000119137 551 ntBASIC2.3□□□□□ -2.04
NcanP55066 Gm16533-201ENSMUST00000140035 228 ntBASIC2.3□□□□□ -2.04
NcanP55066 Gm27926-201ENSMUST00000157180 66 ntBASIC2.3□□□□□ -2.04
NcanP55066 Gm24481-201ENSMUST00000157210 102 ntBASIC2.3□□□□□ -2.04
NcanP55066 Gm25910-201ENSMUST00000157620 140 ntBASIC2.3□□□□□ -2.04
NcanP55066 Gm26029-201ENSMUST00000158659 132 ntBASIC2.3□□□□□ -2.04
NcanP55066 Gm24878-201ENSMUST00000158782 104 ntBASIC2.3□□□□□ -2.04
NcanP55066 Gm23476-201ENSMUST00000158881 274 ntBASIC2.3□□□□□ -2.04
NcanP55066 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NcanP55066 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
NcanP55066 Gm29490-201ENSMUST00000190923 342 ntBASIC2.3□□□□□ -2.04
NcanP55066 Gm44373-201ENSMUST00000196112 169 ntBASIC2.3□□□□□ -2.04
NcanP55066 Gm43510-201ENSMUST00000197922 353 ntBASIC2.3□□□□□ -2.04
NcanP55066 Gm44083-201ENSMUST00000203114 337 ntBASIC2.3□□□□□ -2.04
NcanP55066 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.3□□□□□ -2.04
NcanP55066 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.3□□□□□ -2.04
NcanP55066 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.3□□□□□ -2.04
NcanP55066 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.3□□□□□ -2.04
NcanP55066 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.3□□□□□ -2.04
NcanP55066 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NcanP55066 Gm26164-201ENSMUST00000083793 104 ntBASIC2.3□□□□□ -2.04
NcanP55066 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.3□□□□□ -2.04
NcanP55066 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NcanP55066 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NcanP55066 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
NcanP55066 Gm24172-201ENSMUST00000104127 117 ntBASIC2.29□□□□□ -2.04
NcanP55066 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NcanP55066 Gm24630-201ENSMUST00000122768 106 ntBASIC2.29□□□□□ -2.04
NcanP55066 Gm27396-201ENSMUST00000157708 58 ntBASIC2.29□□□□□ -2.04
NcanP55066 Gm22654-201ENSMUST00000157874 105 ntBASIC2.29□□□□□ -2.04
NcanP55066 Gm24846-201ENSMUST00000158033 108 ntBASIC2.29□□□□□ -2.04
NcanP55066 Gm7953-201ENSMUST00000168278 469 ntBASIC2.29□□□□□ -2.04
NcanP55066 Gm24085-201ENSMUST00000175172 116 ntBASIC2.29□□□□□ -2.04
NcanP55066 Gm21978-201ENSMUST00000179696 377 ntBASIC2.29□□□□□ -2.04
NcanP55066 Mir6901-201ENSMUST00000185062 62 ntBASIC2.29□□□□□ -2.04
NcanP55066 Gm8940-201ENSMUST00000212585 219 ntBASIC2.29□□□□□ -2.04
NcanP55066 Gm33654-201ENSMUST00000221704 215 ntBASIC2.29□□□□□ -2.04
NcanP55066 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.29□□□□□ -2.04
NcanP55066 Gm21937-201ENSMUST00000222825 218 ntBASIC2.29□□□□□ -2.04
NcanP55066 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.29□□□□□ -2.04
NcanP55066 Gm25929-201ENSMUST00000082784 107 ntBASIC2.29□□□□□ -2.04
NcanP55066 Gm25199-201ENSMUST00000083095 104 ntBASIC2.29□□□□□ -2.04
NcanP55066 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.29□□□□□ -2.04
NcanP55066 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
NcanP55066 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
NcanP55066 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NcanP55066 Gm24338-201ENSMUST00000104205 127 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm15211-201ENSMUST00000118932 528 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm22037-201ENSMUST00000157280 296 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm24237-201ENSMUST00000157790 132 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm23033-201ENSMUST00000157996 134 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm25486-201ENSMUST00000158726 63 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm24084-201ENSMUST00000175173 137 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm25397-201ENSMUST00000176951 92 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
NcanP55066 Gm27656-201ENSMUST00000185055 80 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm28724-201ENSMUST00000186149 625 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm43193-201ENSMUST00000197732 441 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm43680-201ENSMUST00000199466 340 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.28□□□□□ -2.04
NcanP55066 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.28□□□□□ -2.04
NcanP55066 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm25402-201ENSMUST00000082966 131 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm23721-201ENSMUST00000083005 107 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.28□□□□□ -2.04
NcanP55066 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.28□□□□□ -2.05
NcanP55066 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.27□□□□□ -2.05
NcanP55066 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.27□□□□□ -2.05
NcanP55066 Gm26421-201ENSMUST00000104279 132 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm23708-201ENSMUST00000104367 123 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm11460-201ENSMUST00000118200 361 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm9059-201ENSMUST00000118319 183 ntBASIC2.27□□□□□ -2.05
NcanP55066 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.27□□□□□ -2.05
NcanP55066 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm26102-201ENSMUST00000157251 284 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm26186-201ENSMUST00000157689 125 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm22101-201ENSMUST00000157928 103 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm22382-201ENSMUST00000158185 130 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm6788-201ENSMUST00000166459 270 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm25671-201ENSMUST00000178612 105 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm23307-201ENSMUST00000179167 105 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm25286-201ENSMUST00000179790 105 ntBASIC2.27□□□□□ -2.05
NcanP55066 Mir7679-201ENSMUST00000183379 63 ntBASIC2.27□□□□□ -2.05
NcanP55066 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 145.4 ms