Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.72□□□□□ -2.13
Sox3P53784 Gm27722-201ENSMUST00000183908 76 ntBASIC1.72□□□□□ -2.13
Sox3P53784 Gm28058-201ENSMUST00000186421 264 ntBASIC1.72□□□□□ -2.13
Sox3P53784 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.72□□□□□ -2.13
Sox3P53784 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.72□□□□□ -2.13
Sox3P53784 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Sox3P53784 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.72□□□□□ -2.13
Sox3P53784 Mir29c-201ENSMUST00000083614 88 ntBASIC1.72□□□□□ -2.13
Sox3P53784 Gm25207-201ENSMUST00000093745 107 ntBASIC1.72□□□□□ -2.13
Sox3P53784 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.72□□□□□ -2.13
Sox3P53784 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
Sox3P53784 Gm14269-201ENSMUST00000120455 306 ntBASIC1.71□□□□□ -2.14
Sox3P53784 Gm15365-201ENSMUST00000122392 300 ntBASIC1.71□□□□□ -2.14
Sox3P53784 Gm24902-201ENSMUST00000158126 123 ntBASIC1.71□□□□□ -2.14
Sox3P53784 Gm20874-201ENSMUST00000178356 663 ntBASIC1.71□□□□□ -2.14
Sox3P53784 Gm28927-201ENSMUST00000191528 272 ntBASIC1.71□□□□□ -2.14
Sox3P53784 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.71□□□□□ -2.14
Sox3P53784 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.71□□□□□ -2.14
Sox3P53784 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.71□□□□□ -2.14
Sox3P53784 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.71□□□□□ -2.14
Sox3P53784 Gm23614-201ENSMUST00000082598 107 ntBASIC1.71□□□□□ -2.14
Sox3P53784 Gm25896-201ENSMUST00000083713 136 ntBASIC1.71□□□□□ -2.14
Sox3P53784 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.71□□□□□ -2.14
Sox3P53784 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.71□□□□□ -2.14
Sox3P53784 Gm25496-201ENSMUST00000104430 120 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Snord98-201ENSMUST00000116819 65 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Gm14882-201ENSMUST00000117216 218 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Gm7164-201ENSMUST00000117503 450 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Gm12432-201ENSMUST00000119540 186 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Gm14530-201ENSMUST00000122391 333 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Sox3P53784 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Sox3P53784 Gm25051-201ENSMUST00000158602 249 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Gm20613-201ENSMUST00000175828 345 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Gm24656-201ENSMUST00000177548 132 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Sox3P53784 Mir6240-201ENSMUST00000184281 117 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Gm19123-201ENSMUST00000190716 651 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Gm42622-201ENSMUST00000197229 355 ntBASIC1.7□□□□□ -2.14
Sox3P53784 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.7□□□□□ -2.14
Sox3P53784 Gm25124-201ENSMUST00000083345 164 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Mir300-201ENSMUST00000083485 79 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.7□□□□□ -2.14
Sox3P53784 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Sox3P53784 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm24342-201ENSMUST00000103907 104 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm14709-201ENSMUST00000121225 304 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm24892-201ENSMUST00000122747 104 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.69□□□□□ -2.14
Sox3P53784 Gm27926-201ENSMUST00000157180 66 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm25059-201ENSMUST00000157367 117 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm22843-201ENSMUST00000157710 134 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm22136-201ENSMUST00000158751 268 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Sox3P53784 Gm19932-201ENSMUST00000177033 313 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm29005-201ENSMUST00000186773 320 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.69□□□□□ -2.14
Sox3P53784 Mir7021-201ENSMUST00000197026 63 ntBASIC1.69□□□□□ -2.14
Sox3P53784 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.69□□□□□ -2.14
Sox3P53784 CT010505.1-201ENSMUST00000227026 396 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm26457-201ENSMUST00000082678 78 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Rny1-201ENSMUST00000083767 112 ntBASIC1.69□□□□□ -2.14
Sox3P53784 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Sox3P53784 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Sox3P53784 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Sox3P53784 Mir701-201ENSMUST00000102208 109 ntBASIC1.68□□□□□ -2.14
Sox3P53784 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Sox3P53784 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.68□□□□□ -2.14
Sox3P53784 Gm24480-201ENSMUST00000157442 103 ntBASIC1.68□□□□□ -2.14
Sox3P53784 Gm24211-201ENSMUST00000158264 107 ntBASIC1.68□□□□□ -2.14
Sox3P53784 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.68□□□□□ -2.14
Sox3P53784 Gm37778-201ENSMUST00000191732 190 ntBASIC1.68□□□□□ -2.14
Sox3P53784 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.68□□□□□ -2.14
Sox3P53784 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.68□□□□□ -2.14
Sox3P53784 Gm20102-201ENSMUST00000222445 220 ntBASIC1.68□□□□□ -2.14
Sox3P53784 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Sox3P53784 Mir148b-201ENSMUST00000083626 97 ntBASIC1.68□□□□□ -2.14
Sox3P53784 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.68□□□□□ -2.14
Sox3P53784 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Sox3P53784 Gm15010-201ENSMUST00000117153 407 ntBASIC1.67□□□□□ -2.14
Sox3P53784 Gm11512-201ENSMUST00000119669 663 ntBASIC1.67□□□□□ -2.14
Sox3P53784 Gm15030-201ENSMUST00000119804 484 ntBASIC1.67□□□□□ -2.14
Sox3P53784 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.67□□□□□ -2.14
Sox3P53784 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Sox3P53784 Gm23983-201ENSMUST00000157142 114 ntBASIC1.67□□□□□ -2.14
Sox3P53784 Gm23169-201ENSMUST00000157157 112 ntBASIC1.67□□□□□ -2.14
Sox3P53784 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.67□□□□□ -2.14
Sox3P53784 Gm44726-201ENSMUST00000203427 217 ntBASIC1.67□□□□□ -2.14
Sox3P53784 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.67□□□□□ -2.14
Sox3P53784 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.67□□□□□ -2.14
Sox3P53784 Gm45815-201ENSMUST00000220241 146 ntBASIC1.67□□□□□ -2.14
Sox3P53784 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.67□□□□□ -2.14
Sox3P53784 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.67□□□□□ -2.14
Sox3P53784 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.67□□□□□ -2.14
Sox3P53784 Gm25589-201ENSMUST00000082502 166 ntBASIC1.67□□□□□ -2.14
Sox3P53784 Gm24261-201ENSMUST00000083744 104 ntBASIC1.67□□□□□ -2.14
Sox3P53784 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.67□□□□□ -2.14
Sox3P53784 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms