Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm25407-201ENSMUST00000104102 134 ntBASIC3.21□□□□□ -1.9
Usp4P35123 Gm26018-201ENSMUST00000104406 128 ntBASIC3.21□□□□□ -1.9
Usp4P35123 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.21□□□□□ -1.9
Usp4P35123 Gm23886-201ENSMUST00000122684 313 ntBASIC3.21□□□□□ -1.9
Usp4P35123 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.21□□□□□ -1.9
Usp4P35123 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Usp4P35123 Mir3068-202ENSMUST00000197755 79 ntBASIC3.21□□□□□ -1.9
Usp4P35123 Gm43427-201ENSMUST00000198188 331 ntBASIC3.21□□□□□ -1.9
Usp4P35123 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.21□□□□□ -1.9
Usp4P35123 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.21□□□□□ -1.9
Usp4P35123 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Usp4P35123 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Usp4P35123 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.2□□□□□ -1.9
Usp4P35123 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Usp4P35123 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
Usp4P35123 Gm25728-201ENSMUST00000104525 159 ntBASIC3.2□□□□□ -1.9
Usp4P35123 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.2□□□□□ -1.9
Usp4P35123 Gm37997-201ENSMUST00000193515 267 ntBASIC3.2□□□□□ -1.9
Usp4P35123 Gm20144-201ENSMUST00000203031 165 ntBASIC3.2□□□□□ -1.9
Usp4P35123 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.2□□□□□ -1.9
Usp4P35123 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Usp4P35123 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Usp4P35123 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Usp4P35123 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Usp4P35123 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Usp4P35123 Gm23990-201ENSMUST00000117031 117 ntBASIC3.19□□□□□ -1.9
Usp4P35123 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Usp4P35123 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.19□□□□□ -1.9
Usp4P35123 Gm20058-201ENSMUST00000186939 284 ntBASIC3.19□□□□□ -1.9
Usp4P35123 Gm43563-201ENSMUST00000196761 198 ntBASIC3.19□□□□□ -1.9
Usp4P35123 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.19□□□□□ -1.9
Usp4P35123 Gm44425-201ENSMUST00000203739 429 ntBASIC3.19□□□□□ -1.9
Usp4P35123 Gm18188-201ENSMUST00000219386 478 ntBASIC3.19□□□□□ -1.9
Usp4P35123 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.19□□□□□ -1.9
Usp4P35123 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.19□□□□□ -1.9
Usp4P35123 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.19□□□□□ -1.9
Usp4P35123 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usp4P35123 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usp4P35123 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Usp4P35123 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp4P35123 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Usp4P35123 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp4P35123 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp4P35123 Gm23013-201ENSMUST00000104146 106 ntBASIC3.18□□□□□ -1.9
Usp4P35123 Gm25915-201ENSMUST00000104265 126 ntBASIC3.18□□□□□ -1.9
Usp4P35123 Gm25425-201ENSMUST00000157611 96 ntBASIC3.18□□□□□ -1.9
Usp4P35123 Gm23589-201ENSMUST00000157660 105 ntBASIC3.18□□□□□ -1.9
Usp4P35123 Gm42774-201ENSMUST00000198854 283 ntBASIC3.18□□□□□ -1.9
Usp4P35123 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.18□□□□□ -1.9
Usp4P35123 Gm5002-201ENSMUST00000207145 223 ntBASIC3.18□□□□□ -1.9
Usp4P35123 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp4P35123 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.18□□□□□ -1.9
Usp4P35123 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Usp4P35123 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp4P35123 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Usp4P35123 Gm26277-201ENSMUST00000157097 152 ntBASIC3.17□□□□□ -1.9
Usp4P35123 Gm22217-201ENSMUST00000157556 313 ntBASIC3.17□□□□□ -1.9
Usp4P35123 Gm22767-201ENSMUST00000158365 165 ntBASIC3.17□□□□□ -1.9
Usp4P35123 Gm7592-201ENSMUST00000160674 627 ntBASIC3.17□□□□□ -1.9
Usp4P35123 Gm7582-201ENSMUST00000160831 603 ntBASIC3.17□□□□□ -1.9
Usp4P35123 Gm16111-201ENSMUST00000162128 285 ntBASIC3.17□□□□□ -1.9
Usp4P35123 Gm4468-201ENSMUST00000170206 294 ntBASIC3.17□□□□□ -1.9
Usp4P35123 Gm20672-201ENSMUST00000176605 261 ntBASIC3.17□□□□□ -1.9
Usp4P35123 Gm24388-201ENSMUST00000177872 107 ntBASIC3.17□□□□□ -1.9
Usp4P35123 Gm27285-201ENSMUST00000183875 127 ntBASIC3.17□□□□□ -1.9
Usp4P35123 Gm29597-201ENSMUST00000188035 308 ntBASIC3.17□□□□□ -1.9
Usp4P35123 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Usp4P35123 Mir384-201ENSMUST00000083565 88 ntBASIC3.17□□□□□ -1.9
Usp4P35123 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.17□□□□□ -1.9
Usp4P35123 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.17□□□□□ -1.9
Usp4P35123 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Usp4P35123 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Usp4P35123 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.16□□□□□ -1.9
Usp4P35123 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Usp4P35123 Gm23492-201ENSMUST00000116837 115 ntBASIC3.16□□□□□ -1.9
Usp4P35123 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.16□□□□□ -1.9
Usp4P35123 Gm24846-201ENSMUST00000158033 108 ntBASIC3.16□□□□□ -1.9
Usp4P35123 Gm24878-201ENSMUST00000158782 104 ntBASIC3.16□□□□□ -1.9
Usp4P35123 Gm23476-201ENSMUST00000158881 274 ntBASIC3.16□□□□□ -1.9
Usp4P35123 Mir669k-201ENSMUST00000177742 127 ntBASIC3.16□□□□□ -1.9
Usp4P35123 Gm25673-201ENSMUST00000179957 127 ntBASIC3.16□□□□□ -1.9
Usp4P35123 Gm19901-201ENSMUST00000192191 495 ntBASIC3.16□□□□□ -1.9
Usp4P35123 Gm43749-201ENSMUST00000199345 352 ntBASIC3.16□□□□□ -1.9
Usp4P35123 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.16□□□□□ -1.9
Usp4P35123 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.16□□□□□ -1.9
Usp4P35123 Gm23615-201ENSMUST00000082602 65 ntBASIC3.16□□□□□ -1.9
Usp4P35123 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.16□□□□□ -1.9
Usp4P35123 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Usp4P35123 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Usp4P35123 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Usp4P35123 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Usp4P35123 Gm8260-201ENSMUST00000119230 353 ntBASIC3.15□□□□□ -1.91
Usp4P35123 Gm25424-201ENSMUST00000157612 58 ntBASIC3.15□□□□□ -1.91
Usp4P35123 Gm17166-201ENSMUST00000172006 431 ntBASIC3.15□□□□□ -1.91
Usp4P35123 Gm37081-201ENSMUST00000192034 196 ntBASIC3.15□□□□□ -1.91
Usp4P35123 Gm18991-201ENSMUST00000209225 746 ntBASIC3.15□□□□□ -1.91
Usp4P35123 Gm19563-201ENSMUST00000222031 270 ntBASIC3.15□□□□□ -1.91
Usp4P35123 Gm25813-201ENSMUST00000082748 191 ntBASIC3.15□□□□□ -1.91
Usp4P35123 Mir184-201ENSMUST00000083662 69 ntBASIC3.15□□□□□ -1.91
Usp4P35123 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms