Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm44598-201ENSMUST00000207566 150 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm26126-201ENSMUST00000083188 164 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Gm23454-201ENSMUST00000083332 133 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Mir344-201ENSMUST00000083634 95 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Mir137-201ENSMUST00000083635 73 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.73□□□□□ -2.13
Col2a1P28481 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Col2a1P28481 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col2a1P28481 Gm22469-201ENSMUST00000104118 133 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Snord98-201ENSMUST00000116819 65 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Gm13876-201ENSMUST00000118451 261 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Gm14269-201ENSMUST00000120455 306 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Gm11606-201ENSMUST00000120706 617 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Gm23704-201ENSMUST00000158844 340 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Mir5099-201ENSMUST00000175257 74 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Gm23793-201ENSMUST00000179396 117 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col2a1P28481 Gm37128-201ENSMUST00000192599 232 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Gm37889-201ENSMUST00000194174 251 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Mir6962-201ENSMUST00000199512 63 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Col2a1P28481 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.72□□□□□ -2.13
Col2a1P28481 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Gm16976-205ENSMUST00000227324 226 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Snord42a-201ENSMUST00000082606 65 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Gm24624-201ENSMUST00000082617 164 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Mir208a-201ENSMUST00000083498 83 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.72□□□□□ -2.13
Col2a1P28481 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
Col2a1P28481 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.13
Col2a1P28481 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Col2a1P28481 Gm11322-201ENSMUST00000118095 435 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Gm22479-201ENSMUST00000122566 81 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Gm22101-201ENSMUST00000157928 103 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Gm22435-201ENSMUST00000158552 128 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Mir6351-201ENSMUST00000183826 99 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Gm29352-201ENSMUST00000188054 544 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Gm44468-201ENSMUST00000199516 105 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Gm44446-201ENSMUST00000204864 255 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Col2a1P28481 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Gm23378-201ENSMUST00000082942 107 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Gm23970-201ENSMUST00000083319 107 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Gm23851-201ENSMUST00000083831 103 ntBASIC1.71□□□□□ -2.14
Col2a1P28481 Gm12235-201ENSMUST00000118596 170 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 Gm14940-201ENSMUST00000119309 495 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.7□□□□□ -2.14
Col2a1P28481 Gm27926-201ENSMUST00000157180 66 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 Gm22386-201ENSMUST00000158192 129 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 Gm28740-201ENSMUST00000186142 215 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 Gm28418-201ENSMUST00000186179 423 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 Gm28058-201ENSMUST00000186421 264 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 Gm43238-201ENSMUST00000196463 359 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.7□□□□□ -2.14
Col2a1P28481 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 Gm26166-201ENSMUST00000083788 107 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Col2a1P28481 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col2a1P28481 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.7□□□□□ -2.14
Col2a1P28481 Gm23142-201ENSMUST00000101848 105 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm26240-201ENSMUST00000101893 105 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm25315-201ENSMUST00000116823 121 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm14923-201ENSMUST00000118270 155 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm23184-201ENSMUST00000122594 131 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Col2a1P28481 Gm29231-201ENSMUST00000179850 319 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Mir6995-201ENSMUST00000183658 71 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm27921-201ENSMUST00000183968 108 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm27869-201ENSMUST00000184327 122 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Mir6371-201ENSMUST00000184470 111 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm7871-201ENSMUST00000195346 618 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm45704-201ENSMUST00000212582 403 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.69□□□□□ -2.14
Col2a1P28481 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Col2a1P28481 Gm23721-201ENSMUST00000083005 107 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm24406-201ENSMUST00000083026 128 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm25937-201ENSMUST00000083912 107 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Col2a1P28481 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col2a1P28481 Gm23336-201ENSMUST00000117023 123 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm9059-201ENSMUST00000118319 183 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm13541-201ENSMUST00000119519 283 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm13518-201ENSMUST00000120018 233 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm23886-201ENSMUST00000122684 313 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.69□□□□□ -2.14
Col2a1P28481 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.69□□□□□ -2.14
Col2a1P28481 Gm22491-201ENSMUST00000157190 102 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms