Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm15536-201ENSMUST00000121411 114 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.25□□□□□ -2.21
Sdc1P18828 Gm25371-201ENSMUST00000158162 101 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 Gm22841-201ENSMUST00000158443 62 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 Gm24551-201ENSMUST00000158645 92 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Sdc1P18828 Mir7j-201ENSMUST00000184427 122 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 Gm28995-201ENSMUST00000186625 261 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 Gm28506-201ENSMUST00000189937 150 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.25□□□□□ -2.21
Sdc1P18828 Gm35736-201ENSMUST00000203681 313 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.25□□□□□ -2.21
Sdc1P18828 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 Gm23515-201ENSMUST00000082829 107 ntBASIC1.25□□□□□ -2.21
Sdc1P18828 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.25□□□□□ -2.21
Sdc1P18828 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
Sdc1P18828 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Sdc1P18828 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Sdc1P18828 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Sdc1P18828 Gm6829-201ENSMUST00000119858 360 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Gm26181-201ENSMUST00000157687 106 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Gm23221-201ENSMUST00000158118 93 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Sdc1P18828 Gm17100-201ENSMUST00000168963 272 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Gm23963-201ENSMUST00000179603 77 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Gm23379-201ENSMUST00000180026 107 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Gm28912-201ENSMUST00000189001 234 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC1.24□□□□□ -2.21
Sdc1P18828 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Gm16976-205ENSMUST00000227324 226 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Sdc1P18828 Gm26314-201ENSMUST00000083891 107 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Gm25207-201ENSMUST00000093745 107 ntBASIC1.24□□□□□ -2.21
Sdc1P18828 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Sdc1P18828 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Sdc1P18828 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 Gm25068-201ENSMUST00000103895 110 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 Gm22099-201ENSMUST00000157925 123 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 Gm23208-201ENSMUST00000158666 127 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 Gm26335-201ENSMUST00000178449 107 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 Gm27755-201ENSMUST00000184623 132 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 Gm29037-201ENSMUST00000189092 313 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 Gm28848-201ENSMUST00000189984 168 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 Gm44491-201ENSMUST00000196794 96 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 Gm45815-201ENSMUST00000220241 146 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 Gm5899-201ENSMUST00000071770 270 ntBASIC1.23□□□□□ -2.21
Sdc1P18828 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
Sdc1P18828 Mir701-201ENSMUST00000102208 109 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Gm14293-201ENSMUST00000118528 577 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.22□□□□□ -2.21
Sdc1P18828 Gm15115-201ENSMUST00000121145 264 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Gm25052-201ENSMUST00000122661 158 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Gm24632-201ENSMUST00000122770 323 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Trav20-201ENSMUST00000142754 347 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Gm25423-201ENSMUST00000157609 107 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Snord13-201ENSMUST00000157627 104 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Gm22862-201ENSMUST00000178593 121 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Gm28597-201ENSMUST00000187664 666 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.22□□□□□ -2.21
Sdc1P18828 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Gm45456-201ENSMUST00000210841 243 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.22□□□□□ -2.21
Sdc1P18828 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Sdc1P18828 Gm25759-201ENSMUST00000103988 129 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm26396-201ENSMUST00000104093 132 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm26342-201ENSMUST00000104557 129 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm11857-201ENSMUST00000119817 324 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm11359-201ENSMUST00000120039 567 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Sdc1P18828 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.21□□□□□ -2.22
Sdc1P18828 Gm8121-201ENSMUST00000153583 499 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm23535-201ENSMUST00000157542 106 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm26393-201ENSMUST00000157625 129 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm27959-201ENSMUST00000185172 111 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm21064-202ENSMUST00000190583 278 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Trbv7-201ENSMUST00000193339 402 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm26265-202ENSMUST00000196326 133 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm23370-201ENSMUST00000199545 130 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm45116-201ENSMUST00000207392 275 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.21□□□□□ -2.22
Sdc1P18828 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Sdc1P18828 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Snord14a-201ENSMUST00000082807 87 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.21□□□□□ -2.22
Sdc1P18828 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.2□□□□□ -2.22
Sdc1P18828 Gm25495-201ENSMUST00000104431 131 ntBASIC1.2□□□□□ -2.22
Sdc1P18828 Gm25559-201ENSMUST00000157182 74 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 389.7 ms