Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm37693-201ENSMUST00000194562 234 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Col1a1P11087 Mir6915-201ENSMUST00000198839 69 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm4732-201ENSMUST00000118778 473 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm12881-201ENSMUST00000121191 203 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm22675-201ENSMUST00000158430 104 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm29513-201ENSMUST00000185741 202 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm23370-201ENSMUST00000199545 130 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.41□□□□□ -2.34
Col1a1P11087 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm2829-201ENSMUST00000213121 499 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Gm10264-201ENSMUST00000220589 429 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Col1a1P11087 Gm22620-201ENSMUST00000082700 133 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.41□□□□□ -2.34
Col1a1P11087 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm26338-201ENSMUST00000102372 110 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm25213-201ENSMUST00000102388 113 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Mir883a-201ENSMUST00000104824 76 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm14624-201ENSMUST00000117746 192 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm13246-201ENSMUST00000120994 315 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm11358-201ENSMUST00000122310 373 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm24896-201ENSMUST00000122741 135 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC0.4□□□□□ -2.35
Col1a1P11087 Gm24480-201ENSMUST00000157442 103 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm23196-201ENSMUST00000158806 107 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm17100-201ENSMUST00000168963 272 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm29134-201ENSMUST00000186579 126 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Col1a1P11087 Gm28337-201ENSMUST00000190425 666 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm31123-201ENSMUST00000192094 666 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm42509-201ENSMUST00000197390 781 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.4□□□□□ -2.35
Col1a1P11087 Gm44211-201ENSMUST00000204867 145 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.4□□□□□ -2.35
Col1a1P11087 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 Gm13603-201ENSMUST00000119404 83 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 Gm25059-201ENSMUST00000157367 117 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 Gm23586-201ENSMUST00000157657 123 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 Gm22510-201ENSMUST00000179304 79 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 Gm26336-201ENSMUST00000179449 79 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 Gm26390-201ENSMUST00000179628 79 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 Gm37599-201ENSMUST00000193067 489 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 Gm44554-201ENSMUST00000208738 147 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.39□□□□□ -2.35
Col1a1P11087 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 Gm19428-201ENSMUST00000220512 1995 ntBASIC0.39□□□□□ -2.35
Col1a1P11087 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Col1a1P11087 Gm16412-201ENSMUST00000121602 273 ntBASIC0.38□□□□□ -2.35
Col1a1P11087 Gm25371-201ENSMUST00000158162 101 ntBASIC0.38□□□□□ -2.35
Col1a1P11087 Gm23144-201ENSMUST00000180226 107 ntBASIC0.38□□□□□ -2.35
Col1a1P11087 Gm27964-201ENSMUST00000185195 62 ntBASIC0.38□□□□□ -2.35
Col1a1P11087 Gm9156-201ENSMUST00000189660 463 ntBASIC0.38□□□□□ -2.35
Col1a1P11087 Gm28408-201ENSMUST00000191557 463 ntBASIC0.38□□□□□ -2.35
Col1a1P11087 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.38□□□□□ -2.35
Col1a1P11087 Gm10297-201ENSMUST00000207136 651 ntBASIC0.38□□□□□ -2.35
Col1a1P11087 Gm20102-201ENSMUST00000222445 220 ntBASIC0.38□□□□□ -2.35
Col1a1P11087 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Col1a1P11087 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Col1a1P11087 Mir695-201ENSMUST00000102261 109 ntBASIC0.37□□□□□ -2.35
Col1a1P11087 Gm25611-201ENSMUST00000104017 133 ntBASIC0.37□□□□□ -2.35
Col1a1P11087 Gm14013-201ENSMUST00000119006 270 ntBASIC0.37□□□□□ -2.35
Col1a1P11087 Gm15177-201ENSMUST00000120491 577 ntBASIC0.37□□□□□ -2.35
Col1a1P11087 Gm25663-201ENSMUST00000157698 135 ntBASIC0.37□□□□□ -2.35
Col1a1P11087 Mir3964-201ENSMUST00000174898 74 ntBASIC0.37□□□□□ -2.35
Col1a1P11087 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Col1a1P11087 Gm26177-201ENSMUST00000178683 107 ntBASIC0.37□□□□□ -2.35
Col1a1P11087 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.37□□□□□ -2.35
Col1a1P11087 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Col1a1P11087 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.37□□□□□ -2.35
Col1a1P11087 Gm22757-201ENSMUST00000102279 96 ntBASIC0.36□□□□□ -2.35
Col1a1P11087 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.36□□□□□ -2.35
Col1a1P11087 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Col1a1P11087 Gm24903-201ENSMUST00000158131 126 ntBASIC0.36□□□□□ -2.35
Col1a1P11087 Gm26405-201ENSMUST00000158495 100 ntBASIC0.36□□□□□ -2.35
Col1a1P11087 Gm25772-201ENSMUST00000158574 56 ntBASIC0.36□□□□□ -2.35
Col1a1P11087 Gm25949-201ENSMUST00000175333 114 ntBASIC0.36□□□□□ -2.35
Col1a1P11087 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.36□□□□□ -2.35
Col1a1P11087 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.36□□□□□ -2.35
Col1a1P11087 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.36□□□□□ -2.35
Col1a1P11087 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.36□□□□□ -2.35
Col1a1P11087 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.36□□□□□ -2.35
Col1a1P11087 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.36□□□□□ -2.35
Col1a1P11087 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.36□□□□□ -2.35
Col1a1P11087 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.36□□□□□ -2.35
Col1a1P11087 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
Col1a1P11087 Trbv24-201ENSMUST00000194614 347 ntBASIC0.36□□□□□ -2.35
Col1a1P11087 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.36□□□□□ -2.35
Col1a1P11087 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.36□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms