Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm9830-201ENSMUST00000178509 357 ntBASIC0.55□□□□□ -2.32
TcraP01849 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
TcraP01849 Gm22263-201ENSMUST00000180060 104 ntBASIC0.55□□□□□ -2.32
TcraP01849 Gm43602-201ENSMUST00000196772 300 ntBASIC0.55□□□□□ -2.32
TcraP01849 Gm44954-201ENSMUST00000208513 227 ntBASIC0.55□□□□□ -2.32
TcraP01849 Gm44548-201ENSMUST00000208929 192 ntBASIC0.55□□□□□ -2.32
TcraP01849 Gm7495-201ENSMUST00000215099 426 ntBASIC0.55□□□□□ -2.32
TcraP01849 Gm8125-201ENSMUST00000216602 738 ntBASIC0.55□□□□□ -2.32
TcraP01849 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.55□□□□□ -2.32
TcraP01849 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.54□□□□□ -2.32
TcraP01849 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
TcraP01849 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.54□□□□□ -2.32
TcraP01849 Mir374b-201ENSMUST00000102314 95 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm24430-201ENSMUST00000104077 104 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm15659-201ENSMUST00000118881 341 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm13396-201ENSMUST00000120617 271 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm23328-201ENSMUST00000157418 132 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm25663-201ENSMUST00000157698 135 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm23419-201ENSMUST00000175523 84 ntBASIC0.54□□□□□ -2.32
TcraP01849 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.54□□□□□ -2.32
TcraP01849 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm24306-201ENSMUST00000180229 79 ntBASIC0.54□□□□□ -2.32
TcraP01849 Mir6240-201ENSMUST00000184281 117 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm28560-201ENSMUST00000186091 315 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm28334-201ENSMUST00000186653 315 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm28495-201ENSMUST00000188452 315 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm28232-201ENSMUST00000188683 315 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm28481-201ENSMUST00000189231 315 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm29059-201ENSMUST00000191534 315 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm37765-201ENSMUST00000192395 315 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm37237-201ENSMUST00000192893 315 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm38213-201ENSMUST00000193203 173 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm36968-201ENSMUST00000193737 315 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm38290-201ENSMUST00000195238 315 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm37089-201ENSMUST00000195616 129 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.54□□□□□ -2.32
TcraP01849 Gm42533-201ENSMUST00000196247 157 ntBASIC0.54□□□□□ -2.32
TcraP01849 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm40810-201ENSMUST00000219149 253 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm18188-201ENSMUST00000219386 478 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm18696-201ENSMUST00000220103 274 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC0.54□□□□□ -2.32
TcraP01849 Gm25475-201ENSMUST00000082825 180 ntBASIC0.54□□□□□ -2.32
TcraP01849 Gm26082-201ENSMUST00000104070 127 ntBASIC0.53□□□□□ -2.32
TcraP01849 Gm16038-201ENSMUST00000159317 193 ntBASIC0.53□□□□□ -2.32
TcraP01849 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.53□□□□□ -2.32
TcraP01849 Gm19901-201ENSMUST00000192191 495 ntBASIC0.53□□□□□ -2.32
TcraP01849 Gm38268-201ENSMUST00000195813 193 ntBASIC0.53□□□□□ -2.32
TcraP01849 Gm42855-201ENSMUST00000197388 253 ntBASIC0.53□□□□□ -2.32
TcraP01849 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.53□□□□□ -2.32
TcraP01849 AC153646.1-201ENSMUST00000223229 1279 ntBASIC0.53□□□□□ -2.32
TcraP01849 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.53□□□□□ -2.32
TcraP01849 Gm25851-201ENSMUST00000082794 107 ntBASIC0.53□□□□□ -2.32
TcraP01849 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
TcraP01849 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.53□□□□□ -2.33
TcraP01849 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
TcraP01849 Gm12102-201ENSMUST00000118251 604 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm23535-201ENSMUST00000157542 106 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm24747-201ENSMUST00000157835 87 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm23760-201ENSMUST00000158350 116 ntBASIC0.52□□□□□ -2.33
TcraP01849 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm20874-201ENSMUST00000178356 663 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm24518-201ENSMUST00000180275 94 ntBASIC0.52□□□□□ -2.33
TcraP01849 Mir7014-201ENSMUST00000183853 63 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm34073-201ENSMUST00000195736 212 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm43556-201ENSMUST00000196186 681 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm43898-201ENSMUST00000204456 424 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm45375-201ENSMUST00000210338 280 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.52□□□□□ -2.33
TcraP01849 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.52□□□□□ -2.33
TcraP01849 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.52□□□□□ -2.33
TcraP01849 AC138667.2-201ENSMUST00000224880 598 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm9795-201ENSMUST00000062156 693 ntBASIC0.52□□□□□ -2.33
TcraP01849 Gm23735-201ENSMUST00000082551 134 ntBASIC0.52□□□□□ -2.33
TcraP01849 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
TcraP01849 Gm26339-201ENSMUST00000102368 99 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm11792-201ENSMUST00000120640 168 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm22477-201ENSMUST00000122569 316 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm23106-201ENSMUST00000157554 101 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm16588-201ENSMUST00000162889 355 ntBASIC0.51□□□□□ -2.33
TcraP01849 Mir3061-201ENSMUST00000175129 91 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm23619-201ENSMUST00000178411 94 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm25474-201ENSMUST00000179052 94 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm22047-201ENSMUST00000179176 94 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm27421-201ENSMUST00000184729 167 ntBASIC0.51□□□□□ -2.33
TcraP01849 Mir8090-201ENSMUST00000185078 136 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.51□□□□□ -2.33
TcraP01849 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.51□□□□□ -2.33
TcraP01849 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm44615-201ENSMUST00000206548 358 ntBASIC0.51□□□□□ -2.33
TcraP01849 AC120553.1-201ENSMUST00000227313 260 ntBASIC0.51□□□□□ -2.33
TcraP01849 AC102291.2-201ENSMUST00000228083 367 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm26228-201ENSMUST00000082512 107 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm25080-201ENSMUST00000082526 107 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm25578-201ENSMUST00000083406 104 ntBASIC0.51□□□□□ -2.33
TcraP01849 Mir216a-201ENSMUST00000083605 72 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm25518-201ENSMUST00000083864 107 ntBASIC0.51□□□□□ -2.33
TcraP01849 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.5□□□□□ -2.33
TcraP01849 Gm24889-201ENSMUST00000104388 132 ntBASIC0.5□□□□□ -2.33
TcraP01849 Gm4732-201ENSMUST00000118778 473 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms