Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.14□□□□□ -2.07
Hcn1O88704 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.14□□□□□ -2.07
Hcn1O88704 Gm25589-201ENSMUST00000082502 166 ntBASIC2.14□□□□□ -2.07
Hcn1O88704 Gm23444-201ENSMUST00000082922 191 ntBASIC2.14□□□□□ -2.07
Hcn1O88704 Gm26111-201ENSMUST00000083969 106 ntBASIC2.14□□□□□ -2.07
Hcn1O88704 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Hcn1O88704 Gm26342-201ENSMUST00000104557 129 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Gm11859-201ENSMUST00000118099 455 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Gm12721-201ENSMUST00000120621 268 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Gm25321-201ENSMUST00000122558 102 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Gm24480-201ENSMUST00000157442 103 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Gm24769-201ENSMUST00000158506 129 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Gm22666-201ENSMUST00000158717 164 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Gm25284-201ENSMUST00000180345 141 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.13□□□□□ -2.07
Hcn1O88704 Gm43583-201ENSMUST00000199235 303 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Gm44960-201ENSMUST00000207403 141 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Gm44564-201ENSMUST00000207985 180 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Hcn1O88704 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Hcn1O88704 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.13□□□□□ -2.07
Hcn1O88704 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Hcn1O88704 Mir872-201ENSMUST00000104728 81 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Gm13432-201ENSMUST00000118861 241 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.12□□□□□ -2.07
Hcn1O88704 Gm24348-201ENSMUST00000158710 130 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Gm24308-201ENSMUST00000177773 114 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Gm27640-201ENSMUST00000184580 147 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Gm28257-201ENSMUST00000185244 463 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.12□□□□□ -2.07
Hcn1O88704 Gm44063-201ENSMUST00000203307 376 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.12□□□□□ -2.07
Hcn1O88704 Gm45013-201ENSMUST00000206883 178 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Hcn1O88704 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Gm22978-201ENSMUST00000082607 160 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Gm22685-201ENSMUST00000082848 106 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Gm22866-201ENSMUST00000083947 177 ntBASIC2.12□□□□□ -2.07
Hcn1O88704 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hcn1O88704 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Hcn1O88704 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Hcn1O88704 Gm24937-201ENSMUST00000122597 134 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 Gm16326-201ENSMUST00000162843 414 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 Gm20613-201ENSMUST00000175828 345 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 Gm19777-201ENSMUST00000191940 358 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 Gm44468-201ENSMUST00000199516 105 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 Gm44419-201ENSMUST00000203338 229 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.11□□□□□ -2.07
Hcn1O88704 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 Gm7214-201ENSMUST00000222428 272 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.11□□□□□ -2.07
Hcn1O88704 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Hcn1O88704 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.11□□□□□ -2.07
Hcn1O88704 Gm14894-201ENSMUST00000117170 270 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 Gm11935-201ENSMUST00000118608 399 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 Gm22945-201ENSMUST00000158557 157 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 Gm16584-201ENSMUST00000159267 189 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 Gm27399-201ENSMUST00000184250 78 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 Gm37449-201ENSMUST00000193016 270 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 Gm18658-201ENSMUST00000195558 270 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 Gm44083-201ENSMUST00000203114 337 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 Gm45386-201ENSMUST00000210194 218 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 Gm23412-201ENSMUST00000083017 107 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 Gm25124-201ENSMUST00000083345 164 ntBASIC2.1□□□□□ -2.07
Hcn1O88704 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Hcn1O88704 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Hcn1O88704 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Hcn1O88704 Gm26249-201ENSMUST00000116708 118 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Gm24896-201ENSMUST00000122741 135 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Hcn1O88704 Gm24799-201ENSMUST00000178431 79 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Gm22263-201ENSMUST00000180060 104 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Gm28008-201ENSMUST00000184021 186 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Gm28016-201ENSMUST00000184594 196 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Mir497-201ENSMUST00000200557 84 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Gm44794-201ENSMUST00000206550 411 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Hcn1O88704 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Gm24698-201ENSMUST00000083883 130 ntBASIC2.09□□□□□ -2.07
Hcn1O88704 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Hcn1O88704 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Hcn1O88704 Gm14803-201ENSMUST00000117163 361 ntBASIC2.08□□□□□ -2.08
Hcn1O88704 Gm6829-201ENSMUST00000119858 360 ntBASIC2.08□□□□□ -2.08
Hcn1O88704 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.08□□□□□ -2.08
Hcn1O88704 Gm25115-201ENSMUST00000157187 140 ntBASIC2.08□□□□□ -2.08
Hcn1O88704 Gm24900-201ENSMUST00000158128 134 ntBASIC2.08□□□□□ -2.08
Hcn1O88704 Gm23262-201ENSMUST00000158323 168 ntBASIC2.08□□□□□ -2.08
Hcn1O88704 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms