Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm24005-201ENSMUST00000158459 296 ntBASIC1.66□□□□□ -2.14
Cldn1O88551 Gm25711-201ENSMUST00000158633 128 ntBASIC1.66□□□□□ -2.14
Cldn1O88551 Gm25488-201ENSMUST00000158728 118 ntBASIC1.66□□□□□ -2.14
Cldn1O88551 Gm28090-201ENSMUST00000189458 664 ntBASIC1.66□□□□□ -2.14
Cldn1O88551 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.66□□□□□ -2.14
Cldn1O88551 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.66□□□□□ -2.14
Cldn1O88551 Gm23242-201ENSMUST00000083055 107 ntBASIC1.66□□□□□ -2.14
Cldn1O88551 Snora69-201ENSMUST00000083708 131 ntBASIC1.66□□□□□ -2.14
Cldn1O88551 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Cldn1O88551 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Cldn1O88551 Gm11935-201ENSMUST00000118608 399 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 Gm11420-201ENSMUST00000120047 402 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Cldn1O88551 Gm3027-201ENSMUST00000167579 451 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 Gm22800-201ENSMUST00000175627 94 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 Gm24388-201ENSMUST00000177872 107 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.65□□□□□ -2.15
Cldn1O88551 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.65□□□□□ -2.15
Cldn1O88551 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.65□□□□□ -2.15
Cldn1O88551 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.65□□□□□ -2.15
Cldn1O88551 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.65□□□□□ -2.15
Cldn1O88551 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.65□□□□□ -2.15
Cldn1O88551 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.65□□□□□ -2.15
Cldn1O88551 Gm25457-201ENSMUST00000179509 107 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.65□□□□□ -2.15
Cldn1O88551 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.65□□□□□ -2.15
Cldn1O88551 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Cldn1O88551 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.65□□□□□ -2.15
Cldn1O88551 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Cldn1O88551 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 Gm22365-201ENSMUST00000093750 117 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.65□□□□□ -2.15
Cldn1O88551 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.65□□□□□ -2.15
Cldn1O88551 Gm24984-201ENSMUST00000104454 133 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm27926-201ENSMUST00000157180 66 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm25909-201ENSMUST00000157619 121 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm23589-201ENSMUST00000157660 105 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm24853-201ENSMUST00000158026 121 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm25658-201ENSMUST00000158472 128 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm24837-201ENSMUST00000158683 81 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm25486-201ENSMUST00000158726 63 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm25956-201ENSMUST00000175115 217 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Mir6355-201ENSMUST00000183687 106 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm37399-201ENSMUST00000195224 416 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm43431-201ENSMUST00000198577 340 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm34783-201ENSMUST00000209159 303 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm45386-201ENSMUST00000210194 218 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Gm22978-201ENSMUST00000082607 160 ntBASIC1.64□□□□□ -2.15
Cldn1O88551 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Cldn1O88551 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Cldn1O88551 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Gm14624-201ENSMUST00000117746 192 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Cldn1O88551 Gm25827-201ENSMUST00000157089 107 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Gm22435-201ENSMUST00000158552 128 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Cldn1O88551 Gm17100-201ENSMUST00000168963 272 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Cldn1O88551 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Cldn1O88551 Gm27410-201ENSMUST00000183851 115 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Mir7039-201ENSMUST00000183852 85 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Gm29397-201ENSMUST00000185205 333 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Gm28058-201ENSMUST00000186421 264 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Cldn1O88551 Gm43238-201ENSMUST00000196463 359 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Gm42807-201ENSMUST00000200141 329 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Gm30155-201ENSMUST00000223458 339 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Gm25578-201ENSMUST00000083406 104 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Gm23041-201ENSMUST00000083868 106 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
Cldn1O88551 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Cldn1O88551 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.63□□□□□ -2.15
Cldn1O88551 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Cldn1O88551 Gm13672-201ENSMUST00000117554 459 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.62□□□□□ -2.15
Cldn1O88551 Gm22316-201ENSMUST00000158012 216 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 Gm26157-201ENSMUST00000158974 126 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 Gm7953-201ENSMUST00000168278 469 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 Gm27722-201ENSMUST00000183908 76 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 Mir6346-201ENSMUST00000183982 81 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 Mir7016-201ENSMUST00000184308 72 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 Gm32175-201ENSMUST00000193641 346 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 Gm43624-201ENSMUST00000197368 180 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 Gm43976-201ENSMUST00000203637 235 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 Gm44687-201ENSMUST00000204975 235 ntBASIC1.62□□□□□ -2.15
Cldn1O88551 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.62□□□□□ -2.15
Cldn1O88551 Gm44938-201ENSMUST00000208614 427 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms