Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.56□□□□□ -2.16
Cdh16O88338 Gm44811-201ENSMUST00000209120 228 ntBASIC1.56□□□□□ -2.16
Cdh16O88338 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.56□□□□□ -2.16
Cdh16O88338 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.56□□□□□ -2.16
Cdh16O88338 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.56□□□□□ -2.16
Cdh16O88338 Gm22364-201ENSMUST00000083097 98 ntBASIC1.56□□□□□ -2.16
Cdh16O88338 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Cdh16O88338 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Cdh16O88338 Gm10360-201ENSMUST00000097219 272 ntBASIC1.56□□□□□ -2.16
Cdh16O88338 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.56□□□□□ -2.16
Cdh16O88338 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
Cdh16O88338 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
Cdh16O88338 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Cdh16O88338 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Cdh16O88338 Gm23951-201ENSMUST00000104029 132 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm23109-201ENSMUST00000116867 126 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm22678-201ENSMUST00000116974 101 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm22073-201ENSMUST00000122668 189 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm25909-201ENSMUST00000157619 121 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm22963-201ENSMUST00000157960 91 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm24853-201ENSMUST00000158026 121 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm22803-201ENSMUST00000158049 283 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm22328-201ENSMUST00000158074 112 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Mir3086-201ENSMUST00000175072 87 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm24573-201ENSMUST00000175499 112 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Cdh16O88338 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm22308-201ENSMUST00000177609 107 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm21737-201ENSMUST00000178112 664 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Cdh16O88338 Gm23191-201ENSMUST00000179147 107 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm20901-201ENSMUST00000180177 664 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Mir6406-201ENSMUST00000183592 120 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm28090-201ENSMUST00000189458 664 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm21647-201ENSMUST00000189755 664 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm28414-201ENSMUST00000190111 294 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm42570-201ENSMUST00000195937 292 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm10264-201ENSMUST00000220589 429 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm22997-201ENSMUST00000082845 107 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm24805-201ENSMUST00000082931 104 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm25578-201ENSMUST00000083406 104 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.55□□□□□ -2.16
Cdh16O88338 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Cdh16O88338 Gm26249-201ENSMUST00000116708 118 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 Snord98-201ENSMUST00000116819 65 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 Gm22217-201ENSMUST00000157556 313 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 Gm24858-201ENSMUST00000158058 323 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 Gm22665-201ENSMUST00000158720 275 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 Gm23660-201ENSMUST00000178362 79 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 Gm24088-201ENSMUST00000179100 79 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 Gm36891-201ENSMUST00000191995 655 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 Gm44384-201ENSMUST00000200208 114 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.54□□□□□ -2.16
Cdh16O88338 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Cdh16O88338 Gm26500-201ENSMUST00000101867 106 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Gm14269-201ENSMUST00000120455 306 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Gm25970-201ENSMUST00000157165 86 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Gm22080-201ENSMUST00000157591 106 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Gm23586-201ENSMUST00000157657 123 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Gm23181-201ENSMUST00000158685 110 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
Cdh16O88338 Snord87-201ENSMUST00000175437 87 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Gm18356-201ENSMUST00000185677 623 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Cdh16O88338 Gm20257-202ENSMUST00000188643 130 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Gm43680-201ENSMUST00000199466 340 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Cdh16O88338 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Gm23404-201ENSMUST00000082543 97 ntBASIC1.53□□□□□ -2.16
Cdh16O88338 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Cdh16O88338 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
Cdh16O88338 Gm13518-201ENSMUST00000120018 233 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Gm25269-201ENSMUST00000122601 104 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.52□□□□□ -2.17
Cdh16O88338 Gm25434-201ENSMUST00000158278 167 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Gm16162-201ENSMUST00000162296 297 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Gm25457-201ENSMUST00000179509 107 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Mir7679-201ENSMUST00000183379 63 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Mir195b-201ENSMUST00000184814 97 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Gm43512-201ENSMUST00000198495 176 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Gm43505-201ENSMUST00000200579 139 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Gm44564-201ENSMUST00000207985 180 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Gm45375-201ENSMUST00000210338 280 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.52□□□□□ -2.17
Cdh16O88338 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
Cdh16O88338 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms