Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm22479-201ENSMUST00000122566 81 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm16362-201ENSMUST00000135189 214 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm25827-201ENSMUST00000157089 107 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm26186-201ENSMUST00000157689 125 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm22085-201ENSMUST00000158344 110 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm22668-201ENSMUST00000158716 260 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Col5a1O88207 Gm24862-201ENSMUST00000179103 79 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm23310-201ENSMUST00000179105 79 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm25461-201ENSMUST00000179293 79 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm27248-201ENSMUST00000184004 166 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm37889-201ENSMUST00000194174 251 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Col5a1O88207 Olfr197-201ENSMUST00000080031 926 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm23412-201ENSMUST00000083017 107 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm25257-201ENSMUST00000083907 110 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.33□□□□□ -2.2
Col5a1O88207 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm22779-201ENSMUST00000104085 107 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm24275-201ENSMUST00000116780 146 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm11935-201ENSMUST00000118608 399 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Col5a1O88207 Gm22561-201ENSMUST00000157331 84 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm25391-201ENSMUST00000157342 134 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm23558-201ENSMUST00000157823 80 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm22328-201ENSMUST00000158074 112 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm20534-201ENSMUST00000172957 172 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm22131-201ENSMUST00000178415 94 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm28418-201ENSMUST00000186179 423 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm37404-201ENSMUST00000195726 359 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Gm43238-201ENSMUST00000196463 359 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.32□□□□□ -2.2
Col5a1O88207 Gm22061-201ENSMUST00000082557 107 ntBASIC1.32□□□□□ -2.2
Col5a1O88207 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
Col5a1O88207 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Col5a1O88207 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
Col5a1O88207 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.31□□□□□ -2.2
Col5a1O88207 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Col5a1O88207 Gm12872-201ENSMUST00000121835 320 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm22957-201ENSMUST00000122511 123 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm23169-201ENSMUST00000157157 112 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm23956-201ENSMUST00000157211 119 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm25283-201ENSMUST00000157272 77 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm26501-201ENSMUST00000178307 107 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm43955-201ENSMUST00000204332 142 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm44657-201ENSMUST00000208568 450 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm44811-201ENSMUST00000209120 228 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm5023-201ENSMUST00000217442 587 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm26446-201ENSMUST00000082455 103 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm23406-201ENSMUST00000082537 122 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
Col5a1O88207 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm25220-201ENSMUST00000157546 95 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm22945-201ENSMUST00000158557 157 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm16038-201ENSMUST00000159317 193 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm27869-201ENSMUST00000184327 122 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm28700-201ENSMUST00000187614 579 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm29490-201ENSMUST00000190923 342 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm44324-201ENSMUST00000198517 135 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Gm43284-201ENSMUST00000200103 253 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.31□□□□□ -2.2
Col5a1O88207 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
Col5a1O88207 Mir687-201ENSMUST00000102166 89 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Mir701-201ENSMUST00000102208 109 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Gm13396-201ENSMUST00000120617 271 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.3□□□□□ -2.2
Col5a1O88207 Gm23469-201ENSMUST00000157131 104 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Gm24813-201ENSMUST00000175310 84 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Mir7063-201ENSMUST00000184158 91 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Gm28288-201ENSMUST00000191019 214 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Gm18982-201ENSMUST00000198118 529 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Gm43529-201ENSMUST00000199178 412 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Gm45119-201ENSMUST00000207612 199 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.3□□□□□ -2.2
Col5a1O88207 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Gm21937-201ENSMUST00000222825 218 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Gm22974-201ENSMUST00000083301 103 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Gm22577-201ENSMUST00000083731 109 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Gm25937-201ENSMUST00000083912 107 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Gm25207-201ENSMUST00000093745 107 ntBASIC1.3□□□□□ -2.2
Col5a1O88207 Mir743b-201ENSMUST00000104751 77 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm11322-201ENSMUST00000118095 435 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm23586-201ENSMUST00000157657 123 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm8114-201ENSMUST00000172225 484 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm26180-201ENSMUST00000179942 107 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm28838-201ENSMUST00000186338 315 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm29635-201ENSMUST00000187221 315 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms