Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.07□□□□□ -1.92
Nedd9O35177 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Nedd9O35177 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Nedd9O35177 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Nedd9O35177 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.06□□□□□ -1.92
Nedd9O35177 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Nedd9O35177 Gm6897-201ENSMUST00000117714 138 ntBASIC3.06□□□□□ -1.92
Nedd9O35177 Gm14758-201ENSMUST00000119104 138 ntBASIC3.06□□□□□ -1.92
Nedd9O35177 Trav20-201ENSMUST00000142754 347 ntBASIC3.06□□□□□ -1.92
Nedd9O35177 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.06□□□□□ -1.92
Nedd9O35177 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.06□□□□□ -1.92
Nedd9O35177 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Nedd9O35177 Gm16326-201ENSMUST00000162843 414 ntBASIC3.06□□□□□ -1.92
Nedd9O35177 Mir6402-201ENSMUST00000183406 80 ntBASIC3.06□□□□□ -1.92
Nedd9O35177 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.06□□□□□ -1.92
Nedd9O35177 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.06□□□□□ -1.92
Nedd9O35177 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Nedd9O35177 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Nedd9O35177 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Nedd9O35177 Gm22154-201ENSMUST00000083844 131 ntBASIC3.06□□□□□ -1.92
Nedd9O35177 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Nedd9O35177 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Nedd9O35177 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Nedd9O35177 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Nedd9O35177 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.05□□□□□ -1.92
Nedd9O35177 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Nedd9O35177 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Nedd9O35177 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Nedd9O35177 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.05□□□□□ -1.92
Nedd9O35177 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Gm24908-201ENSMUST00000157294 127 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Gm27396-201ENSMUST00000157708 58 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Gm24691-201ENSMUST00000157762 140 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Gm7582-201ENSMUST00000160831 603 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Nedd9O35177 Gm22192-201ENSMUST00000175128 85 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Nedd9O35177 Gm27582-201ENSMUST00000184084 126 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.05□□□□□ -1.92
Nedd9O35177 Trbv6-201ENSMUST00000193743 276 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Mir3068-202ENSMUST00000197755 79 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 AC173482.5-201ENSMUST00000224181 327 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Snord47-201ENSMUST00000083034 77 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Gm25632-201ENSMUST00000083112 85 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Gm23461-201ENSMUST00000083265 107 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Nedd9O35177 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.05□□□□□ -1.92
Nedd9O35177 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Nedd9O35177 Gm23202-201ENSMUST00000104376 129 ntBASIC3.04□□□□□ -1.92
Nedd9O35177 Gm11471-201ENSMUST00000121824 198 ntBASIC3.04□□□□□ -1.92
Nedd9O35177 Gm24892-201ENSMUST00000122747 104 ntBASIC3.04□□□□□ -1.92
Nedd9O35177 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.04□□□□□ -1.92
Nedd9O35177 Gm23476-201ENSMUST00000158881 274 ntBASIC3.04□□□□□ -1.92
Nedd9O35177 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Nedd9O35177 Gm25615-201ENSMUST00000177836 94 ntBASIC3.04□□□□□ -1.92
Nedd9O35177 Gm6060-201ENSMUST00000188671 251 ntBASIC3.04□□□□□ -1.92
Nedd9O35177 Gm44429-201ENSMUST00000203542 186 ntBASIC3.04□□□□□ -1.92
Nedd9O35177 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Nedd9O35177 Gm24204-201ENSMUST00000082950 107 ntBASIC3.04□□□□□ -1.92
Nedd9O35177 Gm23039-201ENSMUST00000083870 161 ntBASIC3.04□□□□□ -1.92
Nedd9O35177 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Nedd9O35177 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Nedd9O35177 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Nedd9O35177 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Nedd9O35177 Snord14c-201ENSMUST00000101927 86 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Mir1195-201ENSMUST00000116818 98 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Gm25783-201ENSMUST00000122525 190 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Gm26279-201ENSMUST00000157095 102 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Gm26406-201ENSMUST00000158503 124 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Gm24878-201ENSMUST00000158782 104 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Gm4468-201ENSMUST00000170206 294 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Gm27470-201ENSMUST00000184070 210 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Gm29005-201ENSMUST00000186773 320 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 AC159896.1-201ENSMUST00000215264 215 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Gm10092-201ENSMUST00000077110 180 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Nedd9O35177 Gm26495-201ENSMUST00000083152 137 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Gm22973-201ENSMUST00000083298 191 ntBASIC3.03□□□□□ -1.92
Nedd9O35177 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Nedd9O35177 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
Nedd9O35177 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Nedd9O35177 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Nedd9O35177 Gm23472-201ENSMUST00000101806 191 ntBASIC3.02□□□□□ -1.93
Nedd9O35177 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Nedd9O35177 Mir878-201ENSMUST00000104680 78 ntBASIC3.02□□□□□ -1.93
Nedd9O35177 Gm7209-201ENSMUST00000122339 333 ntBASIC3.02□□□□□ -1.93
Nedd9O35177 Gm22482-201ENSMUST00000122563 359 ntBASIC3.02□□□□□ -1.93
Nedd9O35177 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.02□□□□□ -1.93
Nedd9O35177 Gm24750-201ENSMUST00000157843 104 ntBASIC3.02□□□□□ -1.93
Nedd9O35177 Gm24846-201ENSMUST00000158033 108 ntBASIC3.02□□□□□ -1.93
Nedd9O35177 Gm24497-201ENSMUST00000177868 191 ntBASIC3.02□□□□□ -1.93
Nedd9O35177 Mir6386-201ENSMUST00000183558 104 ntBASIC3.02□□□□□ -1.93
Nedd9O35177 Gm27379-201ENSMUST00000183730 123 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms