Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm28752-201ENSMUST00000188340 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm29378-201ENSMUST00000188723 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28569-201ENSMUST00000188748 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28120-201ENSMUST00000188812 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28369-201ENSMUST00000188993 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm29037-201ENSMUST00000189092 313 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28909-201ENSMUST00000189406 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm28861-201ENSMUST00000189681 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm29180-201ENSMUST00000190003 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm29167-201ENSMUST00000190024 377 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm29575-201ENSMUST00000190597 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm29469-201ENSMUST00000191448 315 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm44794-201ENSMUST00000206550 411 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm24313-201ENSMUST00000082561 133 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Mir32-201ENSMUST00000083610 70 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Trav13d-3J3QMG8 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm23472-201ENSMUST00000101806 191 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm26249-201ENSMUST00000116708 118 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm24598-201ENSMUST00000122510 74 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm25961-201ENSMUST00000157174 135 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm22517-201ENSMUST00000158265 136 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm23005-201ENSMUST00000158950 136 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Mir5624-201ENSMUST00000176635 61 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm23355-201ENSMUST00000177614 107 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm24497-201ENSMUST00000177868 191 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm25939-201ENSMUST00000179876 191 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm23148-201ENSMUST00000180367 107 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm29005-201ENSMUST00000186773 320 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm28408-201ENSMUST00000191557 463 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm37377-201ENSMUST00000191733 304 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm19901-201ENSMUST00000192191 495 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm44482-201ENSMUST00000199232 103 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm42807-201ENSMUST00000200141 329 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm44473-201ENSMUST00000204039 152 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm44909-201ENSMUST00000208756 165 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm23444-201ENSMUST00000082922 191 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm25258-201ENSMUST00000083049 107 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm24977-201ENSMUST00000083106 163 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm24661-201ENSMUST00000083205 104 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm23851-201ENSMUST00000083831 103 ntBASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav13d-3J3QMG8 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav13d-3J3QMG8 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm25168-201ENSMUST00000104189 132 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm25376-201ENSMUST00000104340 133 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm15526-201ENSMUST00000112504 204 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm24274-201ENSMUST00000116787 124 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm14894-201ENSMUST00000117170 270 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm22216-201ENSMUST00000157557 114 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm22947-201ENSMUST00000158559 91 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm22500-201ENSMUST00000158982 99 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm16561-201ENSMUST00000163001 192 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm28951-201ENSMUST00000190742 313 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm37449-201ENSMUST00000193016 270 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm18658-201ENSMUST00000195558 270 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 Gm26265-202ENSMUST00000196326 133 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 AC129017.1-201ENSMUST00000228363 270 ntBASIC2□□□□□ -2.09
Trav13d-3J3QMG8 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm15215-201ENSMUST00000117773 489 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm13880-201ENSMUST00000118421 474 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm13992-201ENSMUST00000120558 156 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm23391-201ENSMUST00000157579 104 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm24769-201ENSMUST00000158506 129 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm27220-201ENSMUST00000183453 262 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm27369-201ENSMUST00000185182 71 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm29665-201ENSMUST00000191457 528 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Mir7661-201ENSMUST00000197023 61 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm22299-201ENSMUST00000082663 136 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Gm22866-201ENSMUST00000083947 177 ntBASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trav13d-3J3QMG8 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trav13d-3J3QMG8 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav13d-3J3QMG8 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.98□□□□□ -2.09
Trav13d-3J3QMG8 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav13d-3J3QMG8 Gm25421-201ENSMUST00000104218 164 ntBASIC1.98□□□□□ -2.09
Trav13d-3J3QMG8 Gm11786-201ENSMUST00000120799 155 ntBASIC1.98□□□□□ -2.09
Trav13d-3J3QMG8 Gm22479-201ENSMUST00000122566 81 ntBASIC1.98□□□□□ -2.09
Trav13d-3J3QMG8 Gm25805-201ENSMUST00000122788 108 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms