Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm22248-201ENSMUST00000082482 150 ntBASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Pcdh1F7BJK1 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm26135-201ENSMUST00000101993 72 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm12143-201ENSMUST00000119666 332 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm13801-201ENSMUST00000120750 160 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm22792-201ENSMUST00000157225 133 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm23755-201ENSMUST00000157578 343 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm22527-201ENSMUST00000158816 106 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm25817-201ENSMUST00000177758 121 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm23933-201ENSMUST00000178405 79 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Snord50b-201ENSMUST00000178497 72 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm24766-201ENSMUST00000179182 121 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm42834-201ENSMUST00000196845 256 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm39147-201ENSMUST00000211376 465 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm23722-201ENSMUST00000083002 130 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.96□□□□□ -1.94
Pcdh1F7BJK1 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Gm24276-201ENSMUST00000102181 110 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Gm12926-201ENSMUST00000121158 409 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Gm6762-201ENSMUST00000121769 289 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Gm25961-201ENSMUST00000157174 135 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Mir1936-201ENSMUST00000158699 93 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Gm25457-201ENSMUST00000179509 107 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Gm29553-201ENSMUST00000189692 279 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Gm37281-201ENSMUST00000192412 439 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Gm9712-201ENSMUST00000210842 311 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Gm25142-201ENSMUST00000082698 107 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Pcdh1F7BJK1 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gm23651-201ENSMUST00000116755 120 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gm22910-201ENSMUST00000178568 132 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gm37918-201ENSMUST00000192071 120 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gm34139-201ENSMUST00000196166 294 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gm45445-201ENSMUST00000209586 232 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gm11351-202ENSMUST00000225724 478 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gm24625-201ENSMUST00000082622 130 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Pcdh1F7BJK1 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm24581-201ENSMUST00000103962 133 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm26423-201ENSMUST00000104277 128 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm22051-201ENSMUST00000117002 127 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm26403-201ENSMUST00000158500 105 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm16546-201ENSMUST00000159442 355 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm27773-201ENSMUST00000184087 78 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm2189-201ENSMUST00000201419 429 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm34779-201ENSMUST00000210036 263 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm18502-201ENSMUST00000218679 199 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm23738-201ENSMUST00000082828 171 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.93□□□□□ -1.94
Pcdh1F7BJK1 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm14448-201ENSMUST00000116383 210 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm15365-201ENSMUST00000122392 300 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm22281-201ENSMUST00000157198 103 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm25572-201ENSMUST00000157527 172 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm27592-201ENSMUST00000157729 126 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm22174-201ENSMUST00000175050 125 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm22692-201ENSMUST00000175055 125 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm27634-201ENSMUST00000175060 126 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm22460-201ENSMUST00000175269 124 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm25535-201ENSMUST00000175364 125 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 115 ms