Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.1□□□□□ -2.39
Trav12-1A0N8R1 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.1□□□□□ -2.39
Trav12-1A0N8R1 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Trav12-1A0N8R1 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Trav12-1A0N8R1 Mir10b-201ENSMUST00000083566 68 ntBASIC0.1□□□□□ -2.39
Trav12-1A0N8R1 Gm25650-201ENSMUST00000083784 162 ntBASIC0.1□□□□□ -2.39
Trav12-1A0N8R1 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Gm12102-201ENSMUST00000118251 604 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Gm13153-201ENSMUST00000120969 637 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Gm12881-201ENSMUST00000121191 203 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Gm14761-201ENSMUST00000121363 262 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Gm22038-201ENSMUST00000157277 242 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Gm22565-201ENSMUST00000175540 69 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Gm22263-201ENSMUST00000180060 104 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Mir7014-201ENSMUST00000183853 63 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Gm29022-201ENSMUST00000190702 225 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Gm43004-201ENSMUST00000201872 703 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 Gm7869-201ENSMUST00000121457 1322 ntBASIC0.09□□□□□ -2.4
Trav12-1A0N8R1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Mir710-201ENSMUST00000102088 110 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Gm26377-201ENSMUST00000102184 108 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Gm14269-201ENSMUST00000120455 306 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Gm25976-201ENSMUST00000158695 130 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Gm16546-201ENSMUST00000159442 355 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Gm24137-201ENSMUST00000180055 79 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Gm22391-201ENSMUST00000180356 79 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Gm44211-201ENSMUST00000204867 145 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Gm44554-201ENSMUST00000208738 147 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Gm5010-201ENSMUST00000213131 260 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.08□□□□□ -2.4
Trav12-1A0N8R1 Gm23130-201ENSMUST00000104252 74 ntBASIC0.07□□□□□ -2.4
Trav12-1A0N8R1 Gm23331-201ENSMUST00000157423 108 ntBASIC0.07□□□□□ -2.4
Trav12-1A0N8R1 Gm25194-201ENSMUST00000177987 79 ntBASIC0.07□□□□□ -2.4
Trav12-1A0N8R1 Gm28921-201ENSMUST00000190219 378 ntBASIC0.07□□□□□ -2.4
Trav12-1A0N8R1 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.07□□□□□ -2.4
Trav12-1A0N8R1 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.07□□□□□ -2.4
Trav12-1A0N8R1 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.07□□□□□ -2.4
Trav12-1A0N8R1 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.07□□□□□ -2.4
Trav12-1A0N8R1 AC121114.1-201ENSMUST00000228522 570 ntBASIC0.07□□□□□ -2.4
Trav12-1A0N8R1 Gm22306-201ENSMUST00000082692 107 ntBASIC0.07□□□□□ -2.4
Trav12-1A0N8R1 Gm25403-201ENSMUST00000082971 143 ntBASIC0.07□□□□□ -2.4
Trav12-1A0N8R1 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.06□□□□□ -2.4
Trav12-1A0N8R1 Gm11248-201ENSMUST00000119568 201 ntBASIC0.06□□□□□ -2.4
Trav12-1A0N8R1 Gm24836-201ENSMUST00000122609 108 ntBASIC0.06□□□□□ -2.4
Trav12-1A0N8R1 Gm26177-201ENSMUST00000178683 107 ntBASIC0.06□□□□□ -2.4
Trav12-1A0N8R1 Gm27475-201ENSMUST00000183420 61 ntBASIC0.06□□□□□ -2.4
Trav12-1A0N8R1 Gm27676-201ENSMUST00000183669 61 ntBASIC0.06□□□□□ -2.4
Trav12-1A0N8R1 Mir7065-201ENSMUST00000185110 61 ntBASIC0.06□□□□□ -2.4
Trav12-1A0N8R1 Gm29216-201ENSMUST00000187117 492 ntBASIC0.06□□□□□ -2.4
Trav12-1A0N8R1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.06□□□□□ -2.4
Trav12-1A0N8R1 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.06□□□□□ -2.4
Trav12-1A0N8R1 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.06□□□□□ -2.4
Trav12-1A0N8R1 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 Gm24630-201ENSMUST00000122768 106 ntBASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 Gm23538-201ENSMUST00000157535 101 ntBASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 Gm22011-201ENSMUST00000158790 123 ntBASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 Gm2962-201ENSMUST00000159266 336 ntBASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 Gm19855-201ENSMUST00000210145 249 ntBASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
Trav12-1A0N8R1 Gm8858-201ENSMUST00000118259 342 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm14359-201ENSMUST00000118883 424 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm25294-201ENSMUST00000122791 104 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm15274-201ENSMUST00000131442 291 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm21979-201ENSMUST00000139887 291 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm9498-201ENSMUST00000140849 291 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm14368-201ENSMUST00000145305 415 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm15259-201ENSMUST00000151262 291 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm27964-201ENSMUST00000185195 62 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm44988-201ENSMUST00000203835 1161 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 AC151902.1-201ENSMUST00000227800 375 ntBASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Trav12-1A0N8R1 Gm23321-201ENSMUST00000104465 126 ntBASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Gm24833-201ENSMUST00000116775 120 ntBASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Gm14775-201ENSMUST00000122089 310 ntBASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Gm25491-201ENSMUST00000158733 308 ntBASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Mir3964-201ENSMUST00000174898 74 ntBASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Gm7258-201ENSMUST00000179317 300 ntBASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Gm27715-201ENSMUST00000184714 260 ntBASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Gm42958-201ENSMUST00000197595 318 ntBASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Gm44921-201ENSMUST00000205290 301 ntBASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.03□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 120.7 ms