Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.21□□□□□ -2.22
Trav16A0A075B653 Gm20656-201ENSMUST00000176925 518 ntBASIC1.21□□□□□ -2.22
Trav16A0A075B653 Gm29397-201ENSMUST00000185205 333 ntBASIC1.21□□□□□ -2.22
Trav16A0A075B653 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trav16A0A075B653 Gm45403-201ENSMUST00000209453 276 ntBASIC1.21□□□□□ -2.22
Trav16A0A075B653 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.21□□□□□ -2.22
Trav16A0A075B653 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.21□□□□□ -2.22
Trav16A0A075B653 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.21□□□□□ -2.22
Trav16A0A075B653 Gm24150-201ENSMUST00000082759 104 ntBASIC1.21□□□□□ -2.22
Trav16A0A075B653 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.21□□□□□ -2.22
Trav16A0A075B653 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Trav16A0A075B653 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm14937-201ENSMUST00000119709 208 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm14269-201ENSMUST00000120455 306 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm15536-201ENSMUST00000121411 114 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm23170-201ENSMUST00000157158 106 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm25914-201ENSMUST00000157618 153 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm25371-201ENSMUST00000158162 101 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm17100-201ENSMUST00000168963 272 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm24085-201ENSMUST00000175172 116 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm44491-201ENSMUST00000196794 96 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm35736-201ENSMUST00000203681 313 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm44654-201ENSMUST00000208052 329 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm5899-201ENSMUST00000071770 270 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Gm22683-201ENSMUST00000082854 137 ntBASIC1.2□□□□□ -2.22
Trav16A0A075B653 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav16A0A075B653 Mir653-201ENSMUST00000102402 85 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trav16A0A075B653 Snord98-201ENSMUST00000116819 65 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Gm6829-201ENSMUST00000119858 360 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Gm23656-201ENSMUST00000122626 112 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Gm24174-201ENSMUST00000158933 111 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Gm28343-201ENSMUST00000185386 112 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Gm28995-201ENSMUST00000186625 261 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Gm26265-202ENSMUST00000196326 133 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Gm45456-201ENSMUST00000210841 243 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.19□□□□□ -2.22
Trav16A0A075B653 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trav16A0A075B653 Mir221-201ENSMUST00000083488 95 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Gm23731-201ENSMUST00000083749 107 ntBASIC1.19□□□□□ -2.22
Trav16A0A075B653 Gm12225-201ENSMUST00000117995 298 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gm11512-201ENSMUST00000119669 663 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gm22718-201ENSMUST00000122701 315 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gm8121-201ENSMUST00000153583 499 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gm23535-201ENSMUST00000157542 106 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gm26181-201ENSMUST00000157687 106 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gm24005-201ENSMUST00000158459 296 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gm24229-201ENSMUST00000158830 118 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gm26430-201ENSMUST00000178054 107 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gm44726-201ENSMUST00000203427 217 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trav16A0A075B653 Snord68-201ENSMUST00000082516 86 ntBASIC1.18□□□□□ -2.22
Trav16A0A075B653 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trav16A0A075B653 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Trav16A0A075B653 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trav16A0A075B653 Gm26396-201ENSMUST00000104093 132 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 Mir1195-201ENSMUST00000116818 98 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 Gm14287-201ENSMUST00000121060 117 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 Gm15529-201ENSMUST00000121833 994 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 Gm23016-201ENSMUST00000158431 62 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 Gm23208-201ENSMUST00000158666 127 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 Gm22136-201ENSMUST00000158751 268 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 Gm17113-201ENSMUST00000170118 171 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.17□□□□□ -2.22
Trav16A0A075B653 Gm28912-201ENSMUST00000189001 234 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Trav16A0A075B653 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Trav16A0A075B653 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.17□□□□□ -2.22
Trav16A0A075B653 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.17□□□□□ -2.22
Trav16A0A075B653 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.16□□□□□ -2.22
Trav16A0A075B653 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Trav16A0A075B653 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.16□□□□□ -2.22
Trav16A0A075B653 Gm22985-201ENSMUST00000122754 116 ntBASIC1.16□□□□□ -2.22
Trav16A0A075B653 Gm24632-201ENSMUST00000122770 323 ntBASIC1.16□□□□□ -2.22
Trav16A0A075B653 Gm25423-201ENSMUST00000157609 107 ntBASIC1.16□□□□□ -2.22
Trav16A0A075B653 Gm22099-201ENSMUST00000157925 123 ntBASIC1.16□□□□□ -2.22
Trav16A0A075B653 Gm24551-201ENSMUST00000158645 92 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 167.3 ms