Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm23419-201ENSMUST00000175523 84 ntBASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Gm23619-201ENSMUST00000178411 94 ntBASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Gm25474-201ENSMUST00000179052 94 ntBASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Gm22047-201ENSMUST00000179176 94 ntBASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Gm24518-201ENSMUST00000180275 94 ntBASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Gm34073-201ENSMUST00000195736 212 ntBASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Gm43911-201ENSMUST00000203097 76 ntBASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Trav6-6A0A075B603 Gm26249-201ENSMUST00000116708 118 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 Gm12806-201ENSMUST00000119384 268 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 Gm25663-201ENSMUST00000157698 135 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 Gm18696-201ENSMUST00000220103 274 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 Gm20102-201ENSMUST00000222445 220 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 AC157654.1-201ENSMUST00000224130 820 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 AC138667.2-201ENSMUST00000224880 598 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 Gm23735-201ENSMUST00000082551 134 ntBASIC0.55□□□□□ -2.32
Trav6-6A0A075B603 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm23000-201ENSMUST00000157083 139 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm23328-201ENSMUST00000157418 132 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm20630-201ENSMUST00000177387 551 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm29661-201ENSMUST00000186781 315 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm29308-201ENSMUST00000188863 315 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm5010-201ENSMUST00000213131 260 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 AC156574.2-201ENSMUST00000228023 282 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm26228-201ENSMUST00000082512 107 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm25080-201ENSMUST00000082526 107 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm22229-201ENSMUST00000082987 108 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Mir350-201ENSMUST00000083639 99 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm25518-201ENSMUST00000083864 107 ntBASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Trav6-6A0A075B603 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm25377-201ENSMUST00000104334 129 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm25491-201ENSMUST00000158733 308 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm17100-201ENSMUST00000168963 272 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm24084-201ENSMUST00000175173 137 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm21815-201ENSMUST00000178213 664 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm26652-202ENSMUST00000181672 475 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Trbv22-201ENSMUST00000191697 291 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm38268-201ENSMUST00000195813 193 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm42533-201ENSMUST00000196247 157 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm44615-201ENSMUST00000206548 358 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.53□□□□□ -2.32
Trav6-6A0A075B603 Gm24889-201ENSMUST00000104388 132 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm4732-201ENSMUST00000118778 473 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm25384-201ENSMUST00000157807 105 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm23777-201ENSMUST00000158994 259 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Mir3061-201ENSMUST00000175129 91 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm27974-201ENSMUST00000183415 105 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Mir6240-201ENSMUST00000184281 117 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Mir7059-201ENSMUST00000184825 59 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm29005-201ENSMUST00000186773 320 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm28688-201ENSMUST00000187301 268 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm19901-201ENSMUST00000192191 495 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm37399-201ENSMUST00000195224 416 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Mir703-201ENSMUST00000197105 109 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm9973-202ENSMUST00000220926 166 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 AC153646.1-201ENSMUST00000223229 1279 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm9795-201ENSMUST00000062156 693 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm25636-201ENSMUST00000082666 133 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.52□□□□□ -2.33
Trav6-6A0A075B603 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms