Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm6660-201ENSMUST00000179149 468 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm29231-201ENSMUST00000179850 319 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm26200-201ENSMUST00000180273 79 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm28090-201ENSMUST00000189458 664 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm34015-201ENSMUST00000194908 451 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm8940-201ENSMUST00000212585 219 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm9318-201ENSMUST00000222444 438 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm25796-201ENSMUST00000082645 163 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm22443-201ENSMUST00000082890 107 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm25578-201ENSMUST00000083406 104 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Scn5aQ9JJV9 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm25888-201ENSMUST00000157778 302 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm22483-201ENSMUST00000157986 274 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm25831-201ENSMUST00000158924 163 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm24813-201ENSMUST00000175310 84 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm9227-201ENSMUST00000194733 566 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm43723-201ENSMUST00000196886 189 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm44524-201ENSMUST00000203899 271 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm10298-201ENSMUST00000074801 265 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm23627-201ENSMUST00000082459 107 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm22502-201ENSMUST00000082488 107 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm22977-201ENSMUST00000082615 107 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm24149-201ENSMUST00000082757 107 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm26166-201ENSMUST00000083788 107 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Mir759-201ENSMUST00000103254 98 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm13396-201ENSMUST00000120617 271 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm23381-201ENSMUST00000157676 94 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm24770-201ENSMUST00000158505 92 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm17919-201ENSMUST00000173344 312 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm18854-201ENSMUST00000211196 329 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm19572-201ENSMUST00000214326 338 ntBASIC1.81□□□□□ -2.12
Scn5aQ9JJV9 Gm12926-201ENSMUST00000121158 409 ntBASIC1.8□□□□□ -2.12
Scn5aQ9JJV9 Gm22216-201ENSMUST00000157557 114 ntBASIC1.8□□□□□ -2.12
Scn5aQ9JJV9 Gm44468-201ENSMUST00000199516 105 ntBASIC1.8□□□□□ -2.12
Scn5aQ9JJV9 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.8□□□□□ -2.12
Scn5aQ9JJV9 Gm24151-201ENSMUST00000082758 141 ntBASIC1.8□□□□□ -2.12
Scn5aQ9JJV9 Gm22577-201ENSMUST00000083731 109 ntBASIC1.8□□□□□ -2.12
Scn5aQ9JJV9 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Scn5aQ9JJV9 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.8□□□□□ -2.12
Scn5aQ9JJV9 Gm24582-201ENSMUST00000103967 103 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm26082-201ENSMUST00000104070 127 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Mir669i-201ENSMUST00000117007 127 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm13714-201ENSMUST00000117313 221 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm24783-201ENSMUST00000157639 100 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm25051-201ENSMUST00000158602 249 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm24810-201ENSMUST00000175317 70 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm25671-201ENSMUST00000178612 105 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm23307-201ENSMUST00000179167 105 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm25286-201ENSMUST00000179790 105 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm29167-201ENSMUST00000190024 377 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm37313-201ENSMUST00000191673 290 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm44182-201ENSMUST00000204052 115 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm44811-201ENSMUST00000209120 228 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm5023-201ENSMUST00000217442 587 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Snord14d-201ENSMUST00000083424 86 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm23040-201ENSMUST00000083869 163 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm23202-201ENSMUST00000104376 129 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm15844-201ENSMUST00000118016 576 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm25325-201ENSMUST00000122559 86 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm24304-201ENSMUST00000177635 107 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm44794-201ENSMUST00000206550 411 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm23412-201ENSMUST00000083017 107 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Mir10a-201ENSMUST00000083585 110 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.79□□□□□ -2.12
Scn5aQ9JJV9 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.78□□□□□ -2.12
Scn5aQ9JJV9 Gm22598-201ENSMUST00000157600 127 ntBASIC1.78□□□□□ -2.12
Scn5aQ9JJV9 Gm29229-201ENSMUST00000188874 323 ntBASIC1.78□□□□□ -2.12
Scn5aQ9JJV9 Gm43238-201ENSMUST00000196463 359 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms