Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm27220-201ENSMUST00000183453 262 ntBASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm28358-202ENSMUST00000189292 223 ntBASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm24350-202ENSMUST00000198309 132 ntBASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm23615-201ENSMUST00000082602 65 ntBASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm22299-201ENSMUST00000082663 136 ntBASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm23679-201ENSMUST00000083161 119 ntBASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm26175-201ENSMUST00000083794 131 ntBASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ddx56Q9D0R4 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Ddx56Q9D0R4 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.93□□□□□ -1.94
Ddx56Q9D0R4 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ddx56Q9D0R4 Gm12897-201ENSMUST00000120341 250 ntBASIC2.93□□□□□ -1.94
Ddx56Q9D0R4 Gm22330-201ENSMUST00000158068 115 ntBASIC2.93□□□□□ -1.94
Ddx56Q9D0R4 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Ddx56Q9D0R4 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ddx56Q9D0R4 Gm42578-201ENSMUST00000199960 194 ntBASIC2.93□□□□□ -1.94
Ddx56Q9D0R4 Gm24977-201ENSMUST00000083106 163 ntBASIC2.93□□□□□ -1.94
Ddx56Q9D0R4 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.93□□□□□ -1.94
Ddx56Q9D0R4 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Gm11862-201ENSMUST00000119678 659 ntBASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Gm15213-201ENSMUST00000122098 216 ntBASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 DQ267100-201ENSMUST00000122600 72 ntBASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Gm24635-201ENSMUST00000122712 128 ntBASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Gm23214-201ENSMUST00000122716 157 ntBASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Mir7578-201ENSMUST00000183455 82 ntBASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Gm27271-201ENSMUST00000183509 170 ntBASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Gm44482-201ENSMUST00000199232 103 ntBASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Gm45386-201ENSMUST00000210194 218 ntBASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Gm45616-201ENSMUST00000211711 319 ntBASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ddx56Q9D0R4 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 Gm24116-201ENSMUST00000103975 107 ntBASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 Gm12417-201ENSMUST00000119153 403 ntBASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 Gm23409-201ENSMUST00000158516 237 ntBASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 Gm37377-201ENSMUST00000191733 304 ntBASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 AC170600.1-201ENSMUST00000228763 277 ntBASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 Gm24625-201ENSMUST00000082622 130 ntBASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 Gm26458-201ENSMUST00000082832 128 ntBASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ddx56Q9D0R4 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Gm22193-201ENSMUST00000116868 76 ntBASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Gm24629-201ENSMUST00000122762 89 ntBASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Gm25115-201ENSMUST00000157187 140 ntBASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Gm27723-201ENSMUST00000157398 63 ntBASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Gm26406-201ENSMUST00000158503 124 ntBASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Gm24736-201ENSMUST00000158862 130 ntBASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Snord53-201ENSMUST00000175146 78 ntBASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Mir7242-201ENSMUST00000183710 79 ntBASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Gm22972-201ENSMUST00000083297 131 ntBASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Ddx56Q9D0R4 Gm25500-201ENSMUST00000104426 123 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 Gm22497-201ENSMUST00000104499 131 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 Gm25111-201ENSMUST00000116686 147 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 Gm11786-201ENSMUST00000120799 155 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 Gm23858-201ENSMUST00000158384 106 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 Gm24879-201ENSMUST00000158386 143 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 Gm25490-201ENSMUST00000158734 130 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 Gm45313-201ENSMUST00000210584 178 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 Gm24316-201ENSMUST00000083041 107 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 Gm10222-201ENSMUST00000088336 294 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.89□□□□□ -1.95
Ddx56Q9D0R4 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Gm24376-201ENSMUST00000104399 127 ntBASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Gm22141-201ENSMUST00000157403 277 ntBASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Gm24837-201ENSMUST00000158683 81 ntBASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Gm24681-201ENSMUST00000158760 107 ntBASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Gm25996-201ENSMUST00000175393 117 ntBASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Gm25470-201ENSMUST00000175576 111 ntBASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Gm30534-201ENSMUST00000217928 207 ntBASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.88□□□□□ -1.95
Ddx56Q9D0R4 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 145.5 ms