Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm12255-201ENSMUST00000117184 284 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm13457-201ENSMUST00000117885 267 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm24598-201ENSMUST00000122510 74 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm25059-201ENSMUST00000157367 117 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm22386-201ENSMUST00000158192 129 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Mir6905-201ENSMUST00000184228 70 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm34073-201ENSMUST00000195736 212 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm44128-201ENSMUST00000204909 219 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm23515-201ENSMUST00000082829 107 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm25896-201ENSMUST00000083713 136 ntBASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm26080-201ENSMUST00000104069 131 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Gm22338-201ENSMUST00000157715 129 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Gm23059-201ENSMUST00000158978 107 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Gm7953-201ENSMUST00000168278 469 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Gm20874-201ENSMUST00000178356 663 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Gm28343-201ENSMUST00000185386 112 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Mir3961-201ENSMUST00000198795 59 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Gm45315-201ENSMUST00000209283 333 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Gm24623-201ENSMUST00000082616 194 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Gm26457-201ENSMUST00000082678 78 ntBASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Sf3b1Q99NB9 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Mir3096-201ENSMUST00000116685 71 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Gm15067-201ENSMUST00000119534 156 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Gm24896-201ENSMUST00000122741 135 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Gm24419-201ENSMUST00000157875 332 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Gm24393-201ENSMUST00000158135 97 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Gm18357-201ENSMUST00000188184 580 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Gm24151-201ENSMUST00000082758 141 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Gm26066-201ENSMUST00000083385 109 ntBASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Sf3b1Q99NB9 Gm14392-201ENSMUST00000120332 401 ntBASIC1.72□□□□□ -2.13
Sf3b1Q99NB9 Gm14413-201ENSMUST00000122158 408 ntBASIC1.72□□□□□ -2.13
Sf3b1Q99NB9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.72□□□□□ -2.13
Sf3b1Q99NB9 Gm20613-201ENSMUST00000175828 345 ntBASIC1.72□□□□□ -2.13
Sf3b1Q99NB9 Mir6341-201ENSMUST00000183490 121 ntBASIC1.72□□□□□ -2.13
Sf3b1Q99NB9 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.72□□□□□ -2.13
Sf3b1Q99NB9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.72□□□□□ -2.13
Sf3b1Q99NB9 Gm44337-201ENSMUST00000196553 114 ntBASIC1.72□□□□□ -2.13
Sf3b1Q99NB9 Gm43245-201ENSMUST00000197603 468 ntBASIC1.72□□□□□ -2.13
Sf3b1Q99NB9 Gm42960-201ENSMUST00000202160 241 ntBASIC1.72□□□□□ -2.13
Sf3b1Q99NB9 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Sf3b1Q99NB9 Gm11522-201ENSMUST00000120533 176 ntBASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 Gm12748-201ENSMUST00000120763 504 ntBASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 Gm22731-201ENSMUST00000158086 94 ntBASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 Gm24577-201ENSMUST00000158580 63 ntBASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 Gm25831-201ENSMUST00000158924 163 ntBASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 Gm27511-201ENSMUST00000183502 127 ntBASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 Gm22299-201ENSMUST00000082663 136 ntBASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.71□□□□□ -2.14
Sf3b1Q99NB9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 U6.1-201ENSMUST00000157443 101 ntBASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Gm9830-201ENSMUST00000178509 357 ntBASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Gm22997-201ENSMUST00000082845 107 ntBASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Gm24406-201ENSMUST00000083026 128 ntBASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Sf3b1Q99NB9 Gm24902-201ENSMUST00000158126 123 ntBASIC1.69□□□□□ -2.14
Sf3b1Q99NB9 Gm22768-201ENSMUST00000158366 153 ntBASIC1.69□□□□□ -2.14
Sf3b1Q99NB9 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.69□□□□□ -2.14
Sf3b1Q99NB9 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.69□□□□□ -2.14
Sf3b1Q99NB9 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.69□□□□□ -2.14
Sf3b1Q99NB9 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 124 ms