Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.28□□□□□ -1.88
Nkx6-1Q99MA9 Gm22304-201ENSMUST00000082688 129 ntBASIC3.28□□□□□ -1.88
Nkx6-1Q99MA9 Snora70-201ENSMUST00000083047 137 ntBASIC3.28□□□□□ -1.88
Nkx6-1Q99MA9 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Nkx6-1Q99MA9 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Gm24283-201ENSMUST00000104233 107 ntBASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Gm14069-201ENSMUST00000120815 229 ntBASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Gm11471-201ENSMUST00000121824 198 ntBASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Gm24676-201ENSMUST00000158758 75 ntBASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Gm27793-201ENSMUST00000183405 76 ntBASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Gm43993-201ENSMUST00000203972 247 ntBASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Gm18617-201ENSMUST00000222311 259 ntBASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Gm25634-201ENSMUST00000082667 105 ntBASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Nkx6-1Q99MA9 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm15377-201ENSMUST00000119594 246 ntBASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm26100-201ENSMUST00000157245 127 ntBASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm23753-201ENSMUST00000157575 149 ntBASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm22382-201ENSMUST00000158185 130 ntBASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm22606-201ENSMUST00000158290 103 ntBASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm22910-201ENSMUST00000178568 132 ntBASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm37281-201ENSMUST00000192412 439 ntBASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm39147-201ENSMUST00000211376 465 ntBASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Nkx6-1Q99MA9 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Gm25071-201ENSMUST00000175232 70 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Gm27470-201ENSMUST00000184070 210 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Gm33866-201ENSMUST00000196911 289 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Gm43901-201ENSMUST00000203247 453 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Gm44223-201ENSMUST00000204854 114 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Gm44887-201ENSMUST00000208980 178 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Gm22248-201ENSMUST00000082482 150 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Gm22421-201ENSMUST00000083058 107 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Nkx6-1Q99MA9 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm26145-201ENSMUST00000104476 127 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm11786-201ENSMUST00000120799 155 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm12926-201ENSMUST00000121158 409 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm25373-201ENSMUST00000158156 115 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm23380-201ENSMUST00000158448 103 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm25253-201ENSMUST00000179958 107 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Mir6916-201ENSMUST00000184514 63 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm6947-201ENSMUST00000186254 78 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm5829-201ENSMUST00000191383 351 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm37575-201ENSMUST00000195467 309 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm22249-201ENSMUST00000082485 136 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm23615-201ENSMUST00000082602 65 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm23247-201ENSMUST00000083373 107 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.24□□□□□ -1.89
Nkx6-1Q99MA9 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Gm15466-201ENSMUST00000122299 333 ntBASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Gm15365-201ENSMUST00000122392 300 ntBASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Gm16533-201ENSMUST00000140035 228 ntBASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Gm25920-201ENSMUST00000158307 99 ntBASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Gm25716-201ENSMUST00000158628 104 ntBASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Mir3092-201ENSMUST00000174954 96 ntBASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Gm28358-202ENSMUST00000189292 223 ntBASIC3.23□□□□□ -1.89
Nkx6-1Q99MA9 Gm37918-201ENSMUST00000192071 120 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms