Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm14816-201ENSMUST00000117174 294 ntBASIC3.73□□□□□ -1.81
Clp1Q99LI9 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Clp1Q99LI9 Gm24480-201ENSMUST00000157442 103 ntBASIC3.73□□□□□ -1.81
Clp1Q99LI9 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.73□□□□□ -1.81
Clp1Q99LI9 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Clp1Q99LI9 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.73□□□□□ -1.81
Clp1Q99LI9 Gm28992-201ENSMUST00000190534 139 ntBASIC3.73□□□□□ -1.81
Clp1Q99LI9 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.73□□□□□ -1.81
Clp1Q99LI9 Mir1291-201ENSMUST00000199842 117 ntBASIC3.73□□□□□ -1.81
Clp1Q99LI9 Gm45013-201ENSMUST00000206883 178 ntBASIC3.73□□□□□ -1.81
Clp1Q99LI9 Gm46993-201ENSMUST00000220708 259 ntBASIC3.73□□□□□ -1.81
Clp1Q99LI9 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.73□□□□□ -1.81
Clp1Q99LI9 Snora34-201ENSMUST00000083402 138 ntBASIC3.73□□□□□ -1.81
Clp1Q99LI9 Gm24762-201ENSMUST00000083689 104 ntBASIC3.73□□□□□ -1.81
Clp1Q99LI9 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Clp1Q99LI9 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Clp1Q99LI9 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.72□□□□□ -1.81
Clp1Q99LI9 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Clp1Q99LI9 Gm25407-201ENSMUST00000104102 134 ntBASIC3.72□□□□□ -1.81
Clp1Q99LI9 Gm23791-201ENSMUST00000122553 293 ntBASIC3.72□□□□□ -1.81
Clp1Q99LI9 Gm25985-201ENSMUST00000122677 107 ntBASIC3.72□□□□□ -1.81
Clp1Q99LI9 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.72□□□□□ -1.81
Clp1Q99LI9 Gm6947-201ENSMUST00000186254 78 ntBASIC3.72□□□□□ -1.81
Clp1Q99LI9 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.72□□□□□ -1.81
Clp1Q99LI9 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.72□□□□□ -1.81
Clp1Q99LI9 Gm26449-201ENSMUST00000082452 104 ntBASIC3.72□□□□□ -1.81
Clp1Q99LI9 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.72□□□□□ -1.81
Clp1Q99LI9 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.72□□□□□ -1.81
Clp1Q99LI9 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Clp1Q99LI9 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Clp1Q99LI9 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.71□□□□□ -1.81
Clp1Q99LI9 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
Clp1Q99LI9 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Clp1Q99LI9 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.71□□□□□ -1.82
Clp1Q99LI9 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm26135-201ENSMUST00000101993 72 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm26145-201ENSMUST00000104476 127 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm25539-201ENSMUST00000116886 122 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm15282-201ENSMUST00000117707 300 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm8244-201ENSMUST00000121254 264 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Clp1Q99LI9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm26088-201ENSMUST00000157896 131 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm22853-201ENSMUST00000174974 131 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Snord50b-201ENSMUST00000178497 72 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm27698-201ENSMUST00000184060 249 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Mir7081-201ENSMUST00000184490 75 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm18991-201ENSMUST00000209225 746 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm9370-201ENSMUST00000222787 609 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm25204-201ENSMUST00000082843 106 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Clp1Q99LI9 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.71□□□□□ -1.82
Clp1Q99LI9 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
Clp1Q99LI9 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Clp1Q99LI9 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Clp1Q99LI9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Clp1Q99LI9 Gm22051-201ENSMUST00000117002 127 ntBASIC3.7□□□□□ -1.82
Clp1Q99LI9 Gm22483-201ENSMUST00000157986 274 ntBASIC3.7□□□□□ -1.82
Clp1Q99LI9 Gm17020-201ENSMUST00000172274 274 ntBASIC3.7□□□□□ -1.82
Clp1Q99LI9 Gm22910-201ENSMUST00000178568 132 ntBASIC3.7□□□□□ -1.82
Clp1Q99LI9 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.7□□□□□ -1.82
Clp1Q99LI9 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.7□□□□□ -1.82
Clp1Q99LI9 Mir7682-201ENSMUST00000198467 58 ntBASIC3.7□□□□□ -1.82
Clp1Q99LI9 Gm45116-201ENSMUST00000207392 275 ntBASIC3.7□□□□□ -1.82
Clp1Q99LI9 Gm18213-201ENSMUST00000207850 178 ntBASIC3.7□□□□□ -1.82
Clp1Q99LI9 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.7□□□□□ -1.82
Clp1Q99LI9 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Clp1Q99LI9 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Clp1Q99LI9 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.7□□□□□ -1.82
Clp1Q99LI9 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.69□□□□□ -1.82
Clp1Q99LI9 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Clp1Q99LI9 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Clp1Q99LI9 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Clp1Q99LI9 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Clp1Q99LI9 Gm22193-201ENSMUST00000116868 76 ntBASIC3.69□□□□□ -1.82
Clp1Q99LI9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.69□□□□□ -1.82
Clp1Q99LI9 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.69□□□□□ -1.82
Clp1Q99LI9 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.69□□□□□ -1.82
Clp1Q99LI9 Gm23231-201ENSMUST00000157299 104 ntBASIC3.69□□□□□ -1.82
Clp1Q99LI9 Gm29553-201ENSMUST00000189692 279 ntBASIC3.69□□□□□ -1.82
Clp1Q99LI9 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.69□□□□□ -1.82
Clp1Q99LI9 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.69□□□□□ -1.82
Clp1Q99LI9 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Clp1Q99LI9 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Clp1Q99LI9 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Clp1Q99LI9 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm22678-201ENSMUST00000116974 101 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm15180-201ENSMUST00000117745 492 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm23123-201ENSMUST00000157648 144 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm22606-201ENSMUST00000158290 103 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm17161-201ENSMUST00000169187 524 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm17522-201ENSMUST00000178144 498 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Clp1Q99LI9 Gm44393-201ENSMUST00000197418 138 ntBASIC3.68□□□□□ -1.82
Clp1Q99LI9 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms