Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm42578-201ENSMUST00000199960 194 ntBASIC3.24□□□□□ -1.89
Ushbp1Q8R370 Gm45288-201ENSMUST00000210236 151 ntBASIC3.24□□□□□ -1.89
Ushbp1Q8R370 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.24□□□□□ -1.89
Ushbp1Q8R370 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.24□□□□□ -1.89
Ushbp1Q8R370 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.24□□□□□ -1.89
Ushbp1Q8R370 Gm22169-201ENSMUST00000083229 107 ntBASIC3.24□□□□□ -1.89
Ushbp1Q8R370 Gm23453-201ENSMUST00000083326 106 ntBASIC3.24□□□□□ -1.89
Ushbp1Q8R370 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Gm23705-201ENSMUST00000104370 130 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Mir466h-201ENSMUST00000104748 81 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Gm24683-201ENSMUST00000104840 88 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Gm11460-201ENSMUST00000118200 361 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Gm24846-201ENSMUST00000158033 108 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Gm24878-201ENSMUST00000158782 104 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Gm4468-201ENSMUST00000170206 294 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Gm29658-201ENSMUST00000185404 230 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Gm37007-201ENSMUST00000194234 319 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Gm37089-201ENSMUST00000195616 129 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.23□□□□□ -1.89
Ushbp1Q8R370 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ushbp1Q8R370 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm24282-201ENSMUST00000104232 66 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm26186-201ENSMUST00000157689 125 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm25664-201ENSMUST00000157697 107 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm22315-201ENSMUST00000158010 143 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm24799-201ENSMUST00000178431 79 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm22259-201ENSMUST00000178926 107 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm27545-201ENSMUST00000184755 202 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm29597-201ENSMUST00000188035 308 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm29553-201ENSMUST00000189692 279 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm44425-201ENSMUST00000203739 429 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm45508-201ENSMUST00000209298 299 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm5899-201ENSMUST00000071770 270 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm24457-201ENSMUST00000083196 105 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Gm23247-201ENSMUST00000083373 107 ntBASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Ushbp1Q8R370 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Ushbp1Q8R370 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Gm24423-201ENSMUST00000101982 106 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Gm24122-201ENSMUST00000104107 132 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Snord72-201ENSMUST00000104549 81 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Gm22984-201ENSMUST00000122751 122 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Gm16111-201ENSMUST00000162128 285 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Gm22853-201ENSMUST00000174974 131 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Gm7958-201ENSMUST00000178255 468 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Gm7950-201ENSMUST00000179633 468 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Gm27803-201ENSMUST00000183763 119 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Gm28849-201ENSMUST00000188127 174 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Gm28330-201ENSMUST00000190353 171 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Mir376a-201ENSMUST00000197584 68 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
Ushbp1Q8R370 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Gm24126-201ENSMUST00000104111 106 ntBASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Gm15497-201ENSMUST00000119137 551 ntBASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Gm8260-201ENSMUST00000119230 353 ntBASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Gm14782-201ENSMUST00000120151 195 ntBASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Gm26277-201ENSMUST00000157097 152 ntBASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Gm23470-201ENSMUST00000157129 120 ntBASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Gm22141-201ENSMUST00000157403 277 ntBASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Mir7068-201ENSMUST00000183439 74 ntBASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.2□□□□□ -1.9
Ushbp1Q8R370 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.2□□□□□ -1.9
Ushbp1Q8R370 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ushbp1Q8R370 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Snord14c-201ENSMUST00000101927 86 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Gm14846-201ENSMUST00000121868 216 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Gm12443-201ENSMUST00000122308 323 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Gm24726-201ENSMUST00000158232 121 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Gm26287-201ENSMUST00000158887 81 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Gm17166-201ENSMUST00000172006 431 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ushbp1Q8R370 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Gm24152-201ENSMUST00000082764 163 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Ushbp1Q8R370 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms