Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gm27379-201ENSMUST00000183730 123 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.58□□□□□ -2
Rfx6Q8C7R7 Gm20257-202ENSMUST00000188643 130 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 Gm29140-201ENSMUST00000190187 476 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 Mir7661-201ENSMUST00000197023 61 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 Mir378a-201ENSMUST00000198300 66 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 Gm43600-201ENSMUST00000202134 223 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.58□□□□□ -2
Rfx6Q8C7R7 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Rfx6Q8C7R7 Gm22358-201ENSMUST00000082877 122 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 Gm25482-201ENSMUST00000083225 107 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 Gm23454-201ENSMUST00000083332 133 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 Gm25188-201ENSMUST00000083913 122 ntBASIC2.58□□□□□ -2
Rfx6Q8C7R7 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Rfx6Q8C7R7 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Rfx6Q8C7R7 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Rfx6Q8C7R7 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm23128-201ENSMUST00000104257 132 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm14551-201ENSMUST00000120802 256 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm24630-201ENSMUST00000122768 106 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm25391-201ENSMUST00000157342 134 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm22227-201ENSMUST00000157356 259 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm24348-201ENSMUST00000158710 130 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm27803-201ENSMUST00000183763 119 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm27959-201ENSMUST00000185172 111 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm7329-201ENSMUST00000185915 210 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm38060-201ENSMUST00000194822 464 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm23128-202ENSMUST00000196578 133 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm34314-201ENSMUST00000203622 367 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.57□□□□□ -2
Rfx6Q8C7R7 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm45508-201ENSMUST00000209298 299 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm25636-201ENSMUST00000082666 133 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm24316-201ENSMUST00000083041 107 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Rfx6Q8C7R7 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.57□□□□□ -2
Rfx6Q8C7R7 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.57□□□□□ -2
Rfx6Q8C7R7 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Rfx6Q8C7R7 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm24172-201ENSMUST00000104127 117 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm24280-201ENSMUST00000104237 134 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm26342-201ENSMUST00000104557 129 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm15936-201ENSMUST00000118706 460 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm23980-201ENSMUST00000157135 158 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm25220-201ENSMUST00000157546 95 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm25333-201ENSMUST00000158035 246 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm24885-201ENSMUST00000158783 270 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm4468-201ENSMUST00000170206 294 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm23355-201ENSMUST00000177614 107 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm23190-201ENSMUST00000180307 64 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm23148-201ENSMUST00000180367 107 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm44977-201ENSMUST00000205283 420 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm44519-201ENSMUST00000206486 122 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm45013-201ENSMUST00000206883 178 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm45859-201ENSMUST00000212794 214 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.56□□□□□ -2
Rfx6Q8C7R7 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm22247-201ENSMUST00000082476 131 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm22685-201ENSMUST00000082848 106 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm25258-201ENSMUST00000083049 107 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm23042-201ENSMUST00000083866 101 ntBASIC2.56□□□□□ -2
Rfx6Q8C7R7 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Rfx6Q8C7R7 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Rfx6Q8C7R7 Gm26186-201ENSMUST00000157689 125 ntBASIC2.55□□□□□ -2
Rfx6Q8C7R7 Gm22842-201ENSMUST00000157709 118 ntBASIC2.55□□□□□ -2
Rfx6Q8C7R7 Gm22654-201ENSMUST00000157874 105 ntBASIC2.55□□□□□ -2
Rfx6Q8C7R7 Gm25528-201ENSMUST00000180264 132 ntBASIC2.55□□□□□ -2
Rfx6Q8C7R7 Mir6353-201ENSMUST00000183596 113 ntBASIC2.55□□□□□ -2
Rfx6Q8C7R7 Gm27470-201ENSMUST00000184070 210 ntBASIC2.55□□□□□ -2
Rfx6Q8C7R7 Gm28921-201ENSMUST00000190219 378 ntBASIC2.55□□□□□ -2
Rfx6Q8C7R7 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.55□□□□□ -2
Rfx6Q8C7R7 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.54□□□□□ -2
Rfx6Q8C7R7 Snord72-201ENSMUST00000104549 81 ntBASIC2.54□□□□□ -2
Rfx6Q8C7R7 Gm13714-201ENSMUST00000117313 221 ntBASIC2.54□□□□□ -2
Rfx6Q8C7R7 Gm11572-201ENSMUST00000119164 120 ntBASIC2.54□□□□□ -2
Rfx6Q8C7R7 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.54□□□□□ -2
Rfx6Q8C7R7 Gm25054-201ENSMUST00000157370 97 ntBASIC2.54□□□□□ -2
Rfx6Q8C7R7 Gm22336-201ENSMUST00000157719 107 ntBASIC2.54□□□□□ -2
Rfx6Q8C7R7 Gm23641-201ENSMUST00000157857 101 ntBASIC2.54□□□□□ -2
Rfx6Q8C7R7 Mir3569-201ENSMUST00000185080 58 ntBASIC2.54□□□□□ -2
Rfx6Q8C7R7 Gm25820-202ENSMUST00000197479 128 ntBASIC2.54□□□□□ -2
Rfx6Q8C7R7 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.54□□□□□ -2
Rfx6Q8C7R7 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.54□□□□□ -2
Rfx6Q8C7R7 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms