Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm28160-201ENSMUST00000191229 315 ntBASIC0.24□□□□□ -2.37
Col6a6Q8C6K9 Gm29469-201ENSMUST00000191448 315 ntBASIC0.24□□□□□ -2.37
Col6a6Q8C6K9 Gm37658-201ENSMUST00000192672 315 ntBASIC0.24□□□□□ -2.37
Col6a6Q8C6K9 Gm37129-201ENSMUST00000195791 315 ntBASIC0.24□□□□□ -2.37
Col6a6Q8C6K9 Gm18410-201ENSMUST00000207199 577 ntBASIC0.24□□□□□ -2.37
Col6a6Q8C6K9 Gm18729-201ENSMUST00000217230 621 ntBASIC0.24□□□□□ -2.37
Col6a6Q8C6K9 Gm18113-201ENSMUST00000220630 303 ntBASIC0.24□□□□□ -2.37
Col6a6Q8C6K9 Gm19441-201ENSMUST00000221545 330 ntBASIC0.24□□□□□ -2.37
Col6a6Q8C6K9 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
Col6a6Q8C6K9 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Col6a6Q8C6K9 Gm25703-201ENSMUST00000083123 151 ntBASIC0.24□□□□□ -2.37
Col6a6Q8C6K9 Gm24047-201ENSMUST00000102405 104 ntBASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm24896-201ENSMUST00000122741 135 ntBASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm23956-201ENSMUST00000157211 119 ntBASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm26152-201ENSMUST00000157427 101 ntBASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm18415-201ENSMUST00000177464 647 ntBASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Mir6335-201ENSMUST00000184081 98 ntBASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm29134-201ENSMUST00000186579 126 ntBASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm28337-201ENSMUST00000190425 666 ntBASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm31123-201ENSMUST00000192094 666 ntBASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.23□□□□□ -2.37
Col6a6Q8C6K9 Gm23691-201ENSMUST00000101878 107 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm23203-201ENSMUST00000104374 107 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm14600-201ENSMUST00000121032 630 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm25543-201ENSMUST00000122678 312 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm27396-201ENSMUST00000157708 58 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm17052-201ENSMUST00000165496 289 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm22800-201ENSMUST00000175627 94 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm25933-201ENSMUST00000178943 108 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Trbv24-201ENSMUST00000194614 347 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Mir3068-202ENSMUST00000197755 79 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Mir6915-201ENSMUST00000198839 69 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm2628-201ENSMUST00000218019 426 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 AC167977.2-201ENSMUST00000225676 682 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm23836-201ENSMUST00000104434 129 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm25283-201ENSMUST00000157272 77 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm20477-201ENSMUST00000174028 280 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm28560-201ENSMUST00000186091 315 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm28334-201ENSMUST00000186653 315 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm28495-201ENSMUST00000188452 315 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm28232-201ENSMUST00000188683 315 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm28481-201ENSMUST00000189231 315 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm9156-201ENSMUST00000189660 463 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm29059-201ENSMUST00000191534 315 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm37765-201ENSMUST00000192395 315 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm37237-201ENSMUST00000192893 315 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm36968-201ENSMUST00000193737 315 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm38290-201ENSMUST00000195238 315 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm30738-201ENSMUST00000221346 502 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Gm26166-201ENSMUST00000083788 107 ntBASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Col6a6Q8C6K9 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm24271-201ENSMUST00000102327 111 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm14624-201ENSMUST00000117746 192 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm11358-201ENSMUST00000122310 373 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm22233-201ENSMUST00000157464 114 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm25868-201ENSMUST00000158253 114 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Atp2b4-208ENSMUST00000167348 243 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm21726-201ENSMUST00000179654 392 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm44300-201ENSMUST00000196792 121 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm24622-201ENSMUST00000082619 162 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Mir33-201ENSMUST00000083531 69 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Mir670-201ENSMUST00000102380 100 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm14568-201ENSMUST00000119321 294 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm23206-201ENSMUST00000122720 184 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm25393-201ENSMUST00000157336 285 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm23331-201ENSMUST00000157423 108 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm22522-201ENSMUST00000158271 151 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm26116-201ENSMUST00000175600 77 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Mir6346-201ENSMUST00000183982 81 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm37869-201ENSMUST00000193385 595 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm22062-201ENSMUST00000082563 107 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm24615-201ENSMUST00000083268 113 ntBASIC0.21□□□□□ -2.38
Col6a6Q8C6K9 Gm13378-201ENSMUST00000117483 336 ntBASIC0.2□□□□□ -2.38
Col6a6Q8C6K9 Rnu7-201ENSMUST00000158458 62 ntBASIC0.2□□□□□ -2.38
Col6a6Q8C6K9 Gm26405-201ENSMUST00000158495 100 ntBASIC0.2□□□□□ -2.38
Col6a6Q8C6K9 Gm22111-201ENSMUST00000178010 79 ntBASIC0.2□□□□□ -2.38
Col6a6Q8C6K9 Gm23687-201ENSMUST00000178664 79 ntBASIC0.2□□□□□ -2.38
Col6a6Q8C6K9 Gm24566-201ENSMUST00000179286 79 ntBASIC0.2□□□□□ -2.38
Col6a6Q8C6K9 Gm23305-201ENSMUST00000179342 79 ntBASIC0.2□□□□□ -2.38
Col6a6Q8C6K9 Gm26389-201ENSMUST00000179819 79 ntBASIC0.2□□□□□ -2.38
Col6a6Q8C6K9 Gm22130-201ENSMUST00000179979 79 ntBASIC0.2□□□□□ -2.38
Col6a6Q8C6K9 Gm22393-201ENSMUST00000180153 79 ntBASIC0.2□□□□□ -2.38
Col6a6Q8C6K9 Gm25085-201ENSMUST00000180298 79 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms