Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Trim47Q8C0E3 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Gm8244-201ENSMUST00000121254 264 ntBASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Gm27934-201ENSMUST00000158795 63 ntBASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Gm7592-201ENSMUST00000160674 627 ntBASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Gm43155-201ENSMUST00000202661 494 ntBASIC4.12□□□□□ -1.75
Trim47Q8C0E3 AC141895.1-201ENSMUST00000218141 273 ntBASIC4.12□□□□□ -1.75
Trim47Q8C0E3 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.12□□□□□ -1.75
Trim47Q8C0E3 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.12□□□□□ -1.75
Trim47Q8C0E3 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Gm10298-201ENSMUST00000074801 265 ntBASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Gm25205-201ENSMUST00000082841 103 ntBASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Trim47Q8C0E3 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Gm16005-201ENSMUST00000120515 269 ntBASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Gm25544-201ENSMUST00000122676 120 ntBASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Gm23168-201ENSMUST00000157156 143 ntBASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Gm25977-201ENSMUST00000158697 85 ntBASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Gm27903-201ENSMUST00000175482 126 ntBASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Gm19620-201ENSMUST00000195972 434 ntBASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim47Q8C0E3 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim47Q8C0E3 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
Trim47Q8C0E3 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.1□□□□□ -1.75
Trim47Q8C0E3 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Gm11786-201ENSMUST00000120799 155 ntBASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Gm23589-201ENSMUST00000157660 105 ntBASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Gm22483-201ENSMUST00000157986 274 ntBASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Mir7062-201ENSMUST00000185038 66 ntBASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Gm37104-201ENSMUST00000193278 196 ntBASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.1□□□□□ -1.75
Trim47Q8C0E3 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim47Q8C0E3 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Trim47Q8C0E3 Gm15180-201ENSMUST00000117745 492 ntBASIC4.09□□□□□ -1.75
Trim47Q8C0E3 Gm16265-201ENSMUST00000134558 108 ntBASIC4.09□□□□□ -1.75
Trim47Q8C0E3 Gm23602-201ENSMUST00000157258 132 ntBASIC4.09□□□□□ -1.75
Trim47Q8C0E3 Gm22108-201ENSMUST00000177961 106 ntBASIC4.09□□□□□ -1.75
Trim47Q8C0E3 Gm24798-201ENSMUST00000179334 106 ntBASIC4.09□□□□□ -1.75
Trim47Q8C0E3 Gm26265-202ENSMUST00000196326 133 ntBASIC4.09□□□□□ -1.75
Trim47Q8C0E3 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.09□□□□□ -1.75
Trim47Q8C0E3 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.09□□□□□ -1.75
Trim47Q8C0E3 AC123709.1-201ENSMUST00000224848 345 ntBASIC4.09□□□□□ -1.75
Trim47Q8C0E3 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.09□□□□□ -1.75
Trim47Q8C0E3 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim47Q8C0E3 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim47Q8C0E3 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.09□□□□□ -1.76
Trim47Q8C0E3 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
Trim47Q8C0E3 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Trim47Q8C0E3 Gm44177-201ENSMUST00000204338 2667 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm23697-201ENSMUST00000103897 110 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm11460-201ENSMUST00000118200 361 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm11704-201ENSMUST00000120031 214 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm25105-201ENSMUST00000122477 130 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm23391-201ENSMUST00000157579 104 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm22540-201ENSMUST00000158168 117 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm26405-201ENSMUST00000158495 100 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm22946-201ENSMUST00000158558 82 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm26466-201ENSMUST00000179615 79 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm45791-201ENSMUST00000212908 352 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 AC135292.1-201ENSMUST00000227665 204 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm23736-201ENSMUST00000082553 75 ntBASIC4.08□□□□□ -1.76
Trim47Q8C0E3 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim47Q8C0E3 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Mir466l-201ENSMUST00000104866 121 ntBASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Gm13167-201ENSMUST00000118554 578 ntBASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Gm22310-201ENSMUST00000157509 116 ntBASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Mir1951-201ENSMUST00000157981 89 ntBASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Gm24358-201ENSMUST00000158424 288 ntBASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Gm23152-201ENSMUST00000175322 116 ntBASIC4.07□□□□□ -1.76
Trim47Q8C0E3 Gm27793-201ENSMUST00000183405 76 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms