Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.71□□□□□ -1.82
Trim56Q80VI1 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Trim56Q80VI1 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim56Q80VI1 Mir1198-201ENSMUST00000116995 121 ntBASIC3.71□□□□□ -1.82
Trim56Q80VI1 Gm14069-201ENSMUST00000120815 229 ntBASIC3.71□□□□□ -1.82
Trim56Q80VI1 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.71□□□□□ -1.82
Trim56Q80VI1 Snora19-201ENSMUST00000082962 132 ntBASIC3.71□□□□□ -1.82
Trim56Q80VI1 Gm23658-201ENSMUST00000083233 132 ntBASIC3.71□□□□□ -1.82
Trim56Q80VI1 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Trim56Q80VI1 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim56Q80VI1 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim56Q80VI1 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm24096-201ENSMUST00000103905 110 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm24605-201ENSMUST00000104772 96 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm23791-201ENSMUST00000122553 293 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm22322-201ENSMUST00000157151 111 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm16404-201ENSMUST00000177739 468 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm14598-201ENSMUST00000180109 468 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm14625-201ENSMUST00000180231 468 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm27921-201ENSMUST00000183968 108 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm29005-201ENSMUST00000186773 320 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm24355-201ENSMUST00000082858 122 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm23297-201ENSMUST00000083184 127 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.7□□□□□ -1.82
Trim56Q80VI1 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim56Q80VI1 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim56Q80VI1 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
Trim56Q80VI1 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Trim56Q80VI1 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim56Q80VI1 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Trim56Q80VI1 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim56Q80VI1 Mir767-201ENSMUST00000103256 107 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim56Q80VI1 Gm9119-201ENSMUST00000118866 495 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 Gm24213-201ENSMUST00000158255 258 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 Gm22606-201ENSMUST00000158290 103 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 Gm22527-201ENSMUST00000158816 106 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 Gm27648-201ENSMUST00000184315 107 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 Gm38356-201ENSMUST00000194313 408 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 Gm18991-201ENSMUST00000209225 746 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 Gm24762-201ENSMUST00000083689 104 ntBASIC3.69□□□□□ -1.82
Trim56Q80VI1 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim56Q80VI1 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim56Q80VI1 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim56Q80VI1 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm23202-201ENSMUST00000104376 129 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm24892-201ENSMUST00000122747 104 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm23234-201ENSMUST00000157304 134 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm43563-201ENSMUST00000196761 198 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm44964-201ENSMUST00000207011 273 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim56Q80VI1 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm22245-201ENSMUST00000082479 103 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm23723-201ENSMUST00000082996 132 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm22297-201ENSMUST00000083312 106 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm25895-201ENSMUST00000083714 100 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
Trim56Q80VI1 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.68□□□□□ -1.82
Trim56Q80VI1 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Trim56Q80VI1 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm23391-201ENSMUST00000157579 104 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm22187-201ENSMUST00000157819 129 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm23559-201ENSMUST00000157824 103 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm24846-201ENSMUST00000158033 108 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm7592-201ENSMUST00000160674 627 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm7582-201ENSMUST00000160831 603 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm26297-201ENSMUST00000179464 132 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm20058-201ENSMUST00000186939 284 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm28358-202ENSMUST00000189292 223 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm44352-201ENSMUST00000196358 110 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm42739-201ENSMUST00000200687 226 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm25634-201ENSMUST00000082667 105 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm25789-201ENSMUST00000083294 76 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Gm10212-201ENSMUST00000087884 324 ntBASIC3.67□□□□□ -1.82
Trim56Q80VI1 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Trim56Q80VI1 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms