Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm27532-201ENSMUST00000183726 113 ntBASIC3.14□□□□□ -1.91
Shkbp1Q6P7W2 Mir721-201ENSMUST00000200230 88 ntBASIC3.14□□□□□ -1.91
Shkbp1Q6P7W2 AF357341-201ENSMUST00000083088 75 ntBASIC3.14□□□□□ -1.91
Shkbp1Q6P7W2 Mir384-201ENSMUST00000083565 88 ntBASIC3.14□□□□□ -1.91
Shkbp1Q6P7W2 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.14□□□□□ -1.91
Shkbp1Q6P7W2 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Mir1b-201ENSMUST00000117012 122 ntBASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Gm14562-201ENSMUST00000129885 543 ntBASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Gm25494-201ENSMUST00000158143 100 ntBASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Gm6660-201ENSMUST00000179149 468 ntBASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Shkbp1Q6P7W2 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Gm14073-201ENSMUST00000117344 381 ntBASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Gm24691-201ENSMUST00000157762 140 ntBASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Gm23642-201ENSMUST00000157858 258 ntBASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Gm27505-201ENSMUST00000185071 110 ntBASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Gm42774-201ENSMUST00000198854 283 ntBASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Gm10360-201ENSMUST00000097219 272 ntBASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.12□□□□□ -1.91
Shkbp1Q6P7W2 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm23331-201ENSMUST00000157423 108 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm24015-201ENSMUST00000157725 232 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm22384-201ENSMUST00000158187 104 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm26291-201ENSMUST00000158889 137 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm24086-201ENSMUST00000175171 98 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm24811-201ENSMUST00000175313 100 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm28155-201ENSMUST00000191066 151 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Trbv6-201ENSMUST00000193743 276 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm37431-201ENSMUST00000195102 111 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm23370-202ENSMUST00000197008 129 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Gm44470-201ENSMUST00000203913 142 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 AC168880.2-201ENSMUST00000224488 201 ntBASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Shkbp1Q6P7W2 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Gm3788-201ENSMUST00000119949 136 ntBASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Gm22316-201ENSMUST00000158012 216 ntBASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Mir5123-201ENSMUST00000177794 83 ntBASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Gm27648-201ENSMUST00000184315 107 ntBASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Gm18991-201ENSMUST00000209225 746 ntBASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Gm23462-201ENSMUST00000083264 104 ntBASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Snord14d-201ENSMUST00000083424 86 ntBASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Gm24762-201ENSMUST00000083689 104 ntBASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
Shkbp1Q6P7W2 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm23013-201ENSMUST00000104146 106 ntBASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm15714-201ENSMUST00000117168 250 ntBASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm25269-201ENSMUST00000122601 104 ntBASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm22883-201ENSMUST00000157376 106 ntBASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm44526-201ENSMUST00000204664 121 ntBASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm22245-201ENSMUST00000082479 103 ntBASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm24148-201ENSMUST00000082762 80 ntBASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm23239-201ENSMUST00000083006 181 ntBASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm22154-201ENSMUST00000083844 131 ntBASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Shkbp1Q6P7W2 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.09□□□□□ -1.92
Shkbp1Q6P7W2 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Shkbp1Q6P7W2 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Shkbp1Q6P7W2 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms