Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Best3Q6H1V1 Gm23911-201ENSMUST00000104596 134 ntBASIC3.69□□□□□ -1.82
Best3Q6H1V1 Gm12513-201ENSMUST00000118617 352 ntBASIC3.69□□□□□ -1.82
Best3Q6H1V1 Gm6829-201ENSMUST00000119858 360 ntBASIC3.69□□□□□ -1.82
Best3Q6H1V1 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.69□□□□□ -1.82
Best3Q6H1V1 Gm24691-201ENSMUST00000157762 140 ntBASIC3.69□□□□□ -1.82
Best3Q6H1V1 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Best3Q6H1V1 Gm7958-201ENSMUST00000178255 468 ntBASIC3.69□□□□□ -1.82
Best3Q6H1V1 Gm21893-201ENSMUST00000179119 397 ntBASIC3.69□□□□□ -1.82
Best3Q6H1V1 Mir6481-201ENSMUST00000184617 110 ntBASIC3.69□□□□□ -1.82
Best3Q6H1V1 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.69□□□□□ -1.82
Best3Q6H1V1 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.69□□□□□ -1.82
Best3Q6H1V1 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Best3Q6H1V1 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Best3Q6H1V1 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Best3Q6H1V1 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Best3Q6H1V1 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Best3Q6H1V1 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Best3Q6H1V1 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Best3Q6H1V1 Gm12926-201ENSMUST00000121158 409 ntBASIC3.68□□□□□ -1.82
Best3Q6H1V1 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Best3Q6H1V1 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.68□□□□□ -1.82
Best3Q6H1V1 Gm20144-201ENSMUST00000203031 165 ntBASIC3.68□□□□□ -1.82
Best3Q6H1V1 Gm44425-201ENSMUST00000203739 429 ntBASIC3.68□□□□□ -1.82
Best3Q6H1V1 Gm44966-201ENSMUST00000208096 157 ntBASIC3.68□□□□□ -1.82
Best3Q6H1V1 Gm45508-201ENSMUST00000209298 299 ntBASIC3.68□□□□□ -1.82
Best3Q6H1V1 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Best3Q6H1V1 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Best3Q6H1V1 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.67□□□□□ -1.82
Best3Q6H1V1 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.67□□□□□ -1.82
Best3Q6H1V1 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Best3Q6H1V1 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Best3Q6H1V1 Gm12721-201ENSMUST00000120621 268 ntBASIC3.67□□□□□ -1.82
Best3Q6H1V1 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.67□□□□□ -1.82
Best3Q6H1V1 Gm26099-201ENSMUST00000157248 109 ntBASIC3.67□□□□□ -1.82
Best3Q6H1V1 Gm27753-201ENSMUST00000184742 203 ntBASIC3.67□□□□□ -1.82
Best3Q6H1V1 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.67□□□□□ -1.82
Best3Q6H1V1 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC3.67□□□□□ -1.82
Best3Q6H1V1 Gm25589-201ENSMUST00000082502 166 ntBASIC3.67□□□□□ -1.82
Best3Q6H1V1 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
Best3Q6H1V1 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 Mir1195-201ENSMUST00000116818 98 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 Gm22141-201ENSMUST00000157403 277 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 Gm25012-201ENSMUST00000158396 164 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 Mir3092-201ENSMUST00000174954 96 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 Gm22800-201ENSMUST00000175627 94 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 Gm26265-202ENSMUST00000196326 133 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Best3Q6H1V1 Gm25789-201ENSMUST00000083294 76 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 Gm10212-201ENSMUST00000087884 324 ntBASIC3.66□□□□□ -1.82
Best3Q6H1V1 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.66□□□□□ -1.82
Best3Q6H1V1 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Best3Q6H1V1 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.65□□□□□ -1.82
Best3Q6H1V1 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Best3Q6H1V1 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.65□□□□□ -1.82
Best3Q6H1V1 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.65□□□□□ -1.82
Best3Q6H1V1 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Best3Q6H1V1 Gm24867-201ENSMUST00000104161 107 ntBASIC3.65□□□□□ -1.83
Best3Q6H1V1 Gm22674-201ENSMUST00000104413 131 ntBASIC3.65□□□□□ -1.83
Best3Q6H1V1 Gm12723-201ENSMUST00000120700 451 ntBASIC3.65□□□□□ -1.83
Best3Q6H1V1 Gm22883-201ENSMUST00000157376 106 ntBASIC3.65□□□□□ -1.83
Best3Q6H1V1 Gm28002-201ENSMUST00000184832 100 ntBASIC3.65□□□□□ -1.83
Best3Q6H1V1 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.65□□□□□ -1.83
Best3Q6H1V1 Gm42834-201ENSMUST00000196845 256 ntBASIC3.65□□□□□ -1.83
Best3Q6H1V1 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.65□□□□□ -1.83
Best3Q6H1V1 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.65□□□□□ -1.83
Best3Q6H1V1 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Best3Q6H1V1 Gm25059-201ENSMUST00000157367 117 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 Gm22145-201ENSMUST00000157396 148 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.64□□□□□ -1.83
Best3Q6H1V1 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Best3Q6H1V1 Gm25020-201ENSMUST00000178071 107 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 Gm7950-201ENSMUST00000179633 468 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 Gm43521-201ENSMUST00000197838 255 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 Gm43107-201ENSMUST00000198729 255 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 Gm10092-201ENSMUST00000077110 180 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 Gm24625-201ENSMUST00000082622 130 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.64□□□□□ -1.83
Best3Q6H1V1 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Best3Q6H1V1 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Best3Q6H1V1 Gm22678-201ENSMUST00000116974 101 ntBASIC3.63□□□□□ -1.83
Best3Q6H1V1 Gm12797-201ENSMUST00000118645 273 ntBASIC3.63□□□□□ -1.83
Best3Q6H1V1 Gm23183-201ENSMUST00000122595 323 ntBASIC3.63□□□□□ -1.83
Best3Q6H1V1 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.63□□□□□ -1.83
Best3Q6H1V1 Gm24480-201ENSMUST00000157442 103 ntBASIC3.63□□□□□ -1.83
Best3Q6H1V1 Gm23002-201ENSMUST00000179221 107 ntBASIC3.63□□□□□ -1.83
Best3Q6H1V1 Gm27803-201ENSMUST00000183763 119 ntBASIC3.63□□□□□ -1.83
Best3Q6H1V1 Mir7014-201ENSMUST00000183853 63 ntBASIC3.63□□□□□ -1.83
Best3Q6H1V1 Gm43220-201ENSMUST00000199299 282 ntBASIC3.63□□□□□ -1.83
Best3Q6H1V1 Gm6842-201ENSMUST00000211361 390 ntBASIC3.63□□□□□ -1.83
Best3Q6H1V1 Gm25401-201ENSMUST00000082975 106 ntBASIC3.63□□□□□ -1.83
Best3Q6H1V1 Gm26495-201ENSMUST00000083152 137 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 133.4 ms