Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm45687-201ENSMUST00000209454 155 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Snora70-201ENSMUST00000083047 137 ntBASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sh3rf1Q69ZI1 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm22115-201ENSMUST00000103976 133 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm23923-201ENSMUST00000104108 133 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm5762-201ENSMUST00000119204 258 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm13443-201ENSMUST00000120770 555 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm23602-201ENSMUST00000157258 132 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm24008-201ENSMUST00000157733 138 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm23666-201ENSMUST00000158053 116 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm34139-201ENSMUST00000196166 294 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm42844-201ENSMUST00000200355 112 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm32381-201ENSMUST00000203192 476 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm43993-201ENSMUST00000203972 247 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm45080-201ENSMUST00000206648 283 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm22739-201ENSMUST00000083437 160 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Gm25409-201ENSMUST00000083764 131 ntBASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Sh3rf1Q69ZI1 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm22497-201ENSMUST00000104499 131 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Snord89-201ENSMUST00000104516 110 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Snord90-201ENSMUST00000104568 111 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm14518-201ENSMUST00000117351 542 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm14020-201ENSMUST00000118165 662 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm6952-201ENSMUST00000118629 159 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm24650-201ENSMUST00000157105 103 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm25889-201ENSMUST00000157775 107 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm24959-201ENSMUST00000157924 146 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm25438-201ENSMUST00000158281 110 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm17161-201ENSMUST00000169187 524 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm17522-201ENSMUST00000178144 498 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm25142-201ENSMUST00000082698 107 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm25480-201ENSMUST00000083217 133 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sh3rf1Q69ZI1 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
Sh3rf1Q69ZI1 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Gm23391-201ENSMUST00000157579 104 ntBASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Gm27903-201ENSMUST00000175482 126 ntBASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Gm37290-201ENSMUST00000195775 339 ntBASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Gm10298-201ENSMUST00000074801 265 ntBASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Gm23847-201ENSMUST00000083829 110 ntBASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.52□□□□□ -1.85
Sh3rf1Q69ZI1 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm24283-201ENSMUST00000104233 107 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm23175-201ENSMUST00000104371 132 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm12723-201ENSMUST00000120700 451 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm22957-201ENSMUST00000122511 123 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm25835-201ENSMUST00000158917 144 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm25198-201ENSMUST00000178574 110 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Mir6914-201ENSMUST00000184999 69 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Mir3969-201ENSMUST00000197106 92 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm2189-201ENSMUST00000201419 429 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm21007-201ENSMUST00000221024 326 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm25789-201ENSMUST00000083294 76 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 Gm24030-201ENSMUST00000083931 164 ntBASIC3.51□□□□□ -1.85
Sh3rf1Q69ZI1 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 383.2 ms