Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm24165-201ENSMUST00000082718 128 ntBASIC1.63□□□□□ -2.15
Usf1Q61069 Gm25813-201ENSMUST00000082748 191 ntBASIC1.63□□□□□ -2.15
Usf1Q61069 Mir107-201ENSMUST00000083660 87 ntBASIC1.63□□□□□ -2.15
Usf1Q61069 BC022960-201ENSMUST00000119987 1815 ntBASIC1.63□□□□□ -2.15
Usf1Q61069 Gm11835-201ENSMUST00000120635 663 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Gm25279-201ENSMUST00000122608 133 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Gm22199-201ENSMUST00000122660 126 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Usf1Q61069 Gm24577-201ENSMUST00000158580 63 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Gm21737-201ENSMUST00000178112 664 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Gm21815-201ENSMUST00000178213 664 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Gm20901-201ENSMUST00000180177 664 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Mir6995-201ENSMUST00000183658 71 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Usf1Q61069 Gm28090-201ENSMUST00000189458 664 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Gm21647-201ENSMUST00000189755 664 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Gm19123-201ENSMUST00000190716 651 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Usf1Q61069 Snord43-201ENSMUST00000199549 108 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.62□□□□□ -2.15
Usf1Q61069 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Gm25651-201ENSMUST00000083782 119 ntBASIC1.62□□□□□ -2.15
Usf1Q61069 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.62□□□□□ -2.15
Usf1Q61069 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Usf1Q61069 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Usf1Q61069 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.61□□□□□ -2.15
Usf1Q61069 Gm24282-201ENSMUST00000104232 66 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Gm12926-201ENSMUST00000121158 409 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Gm25059-201ENSMUST00000157367 117 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Gm24480-201ENSMUST00000157442 103 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Gm22555-201ENSMUST00000157801 62 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Gm23022-201ENSMUST00000158768 180 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Gm20874-201ENSMUST00000178356 663 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
Usf1Q61069 Gm27722-201ENSMUST00000183908 76 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Gm44482-201ENSMUST00000199232 103 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Usf1Q61069 Gm26066-201ENSMUST00000083385 109 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Gm24412-201ENSMUST00000083426 109 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Mir151-201ENSMUST00000083678 68 ntBASIC1.61□□□□□ -2.15
Usf1Q61069 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Usf1Q61069 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Usf1Q61069 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Usf1Q61069 Gm11786-201ENSMUST00000120799 155 ntBASIC1.6□□□□□ -2.15
Usf1Q61069 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.6□□□□□ -2.15
Usf1Q61069 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.6□□□□□ -2.15
Usf1Q61069 Gm25115-201ENSMUST00000157187 140 ntBASIC1.6□□□□□ -2.15
Usf1Q61069 Gm25831-201ENSMUST00000158924 163 ntBASIC1.6□□□□□ -2.15
Usf1Q61069 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Usf1Q61069 Gm17148-201ENSMUST00000164702 249 ntBASIC1.6□□□□□ -2.15
Usf1Q61069 Gm25994-201ENSMUST00000175392 101 ntBASIC1.6□□□□□ -2.15
Usf1Q61069 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Usf1Q61069 Mir6950-201ENSMUST00000184438 73 ntBASIC1.6□□□□□ -2.15
Usf1Q61069 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Usf1Q61069 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Usf1Q61069 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.6□□□□□ -2.15
Usf1Q61069 Gm25589-201ENSMUST00000082502 166 ntBASIC1.6□□□□□ -2.15
Usf1Q61069 Gm25896-201ENSMUST00000083713 136 ntBASIC1.6□□□□□ -2.15
Usf1Q61069 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Usf1Q61069 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Usf1Q61069 Gm12512-201ENSMUST00000119620 217 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Gm12433-201ENSMUST00000119659 255 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.59□□□□□ -2.15
Usf1Q61069 Mir1949-201ENSMUST00000157434 141 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 U6.1-201ENSMUST00000157443 101 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Gm24333-201ENSMUST00000175101 84 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Gm22308-201ENSMUST00000177609 107 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Usf1Q61069 Gm25314-201ENSMUST00000178810 79 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.59□□□□□ -2.15
Usf1Q61069 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Usf1Q61069 Gm9227-201ENSMUST00000194733 566 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Gm44337-201ENSMUST00000196553 114 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Gm43911-201ENSMUST00000203097 76 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Gm44128-201ENSMUST00000204909 219 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.59□□□□□ -2.15
Usf1Q61069 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Gm22997-201ENSMUST00000082845 107 ntBASIC1.59□□□□□ -2.15
Usf1Q61069 Mir701-201ENSMUST00000102208 109 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Usf1Q61069 Gm24896-201ENSMUST00000122741 135 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Gm15899-201ENSMUST00000128586 238 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.58□□□□□ -2.16
Usf1Q61069 Gm23983-201ENSMUST00000157142 114 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Gm22338-201ENSMUST00000157715 129 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Gm23016-201ENSMUST00000158431 62 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Gm7953-201ENSMUST00000168278 469 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Gm9830-201ENSMUST00000178509 357 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Usf1Q61069 Gm27236-201ENSMUST00000184147 442 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.58□□□□□ -2.16
Usf1Q61069 Gm44726-201ENSMUST00000203427 217 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Gm45402-201ENSMUST00000211796 223 ntBASIC1.58□□□□□ -2.16
Usf1Q61069 Gm46312-201ENSMUST00000220961 420 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms