Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm25896-201ENSMUST00000083713 136 ntBASIC1.16□□□□□ -2.22
Trav3-3Q5R1C3 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.15□□□□□ -2.22
Trav3-3Q5R1C3 Gm23015-201ENSMUST00000104145 128 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm24282-201ENSMUST00000104232 66 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm25507-201ENSMUST00000116981 144 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Rnu7-201ENSMUST00000158458 62 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm16038-201ENSMUST00000159317 193 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm24390-201ENSMUST00000179578 62 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm28912-201ENSMUST00000189001 234 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm37081-201ENSMUST00000192034 196 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm43035-201ENSMUST00000197626 517 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm45315-201ENSMUST00000209283 333 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm26922-201ENSMUST00000082687 72 ntBASIC1.15□□□□□ -2.23
Trav3-3Q5R1C3 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm22771-201ENSMUST00000104449 91 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm26342-201ENSMUST00000104557 129 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm14355-201ENSMUST00000117352 264 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm12351-201ENSMUST00000118727 292 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm25102-201ENSMUST00000122479 112 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm23656-201ENSMUST00000122626 112 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm22027-201ENSMUST00000122737 127 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm14364-201ENSMUST00000129209 267 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm23411-201ENSMUST00000157988 62 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm22263-201ENSMUST00000180060 104 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm29640-201ENSMUST00000187972 278 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Gm7495-201ENSMUST00000215099 426 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.14□□□□□ -2.23
Trav3-3Q5R1C3 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Mir374b-201ENSMUST00000102314 95 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Gm26396-201ENSMUST00000104093 132 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Gm12417-201ENSMUST00000119153 403 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Gm6829-201ENSMUST00000119858 360 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Gm14766-201ENSMUST00000121689 367 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Gm22308-201ENSMUST00000177609 107 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Gm28995-201ENSMUST00000186625 261 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Mir378a-201ENSMUST00000198300 66 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Gm18453-201ENSMUST00000208000 626 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Snord14a-201ENSMUST00000082807 87 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Snord118-201ENSMUST00000082965 135 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.13□□□□□ -2.23
Trav3-3Q5R1C3 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm25495-201ENSMUST00000104431 131 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm14937-201ENSMUST00000119709 208 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm26150-201ENSMUST00000157426 151 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm25423-201ENSMUST00000157609 107 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm22099-201ENSMUST00000157925 123 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm24858-201ENSMUST00000158058 323 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm24726-201ENSMUST00000158232 121 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm11392-201ENSMUST00000181419 710 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm18185-201ENSMUST00000186725 667 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm28383-201ENSMUST00000187563 139 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm29262-201ENSMUST00000190084 196 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm45207-201ENSMUST00000207469 145 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Gm24615-201ENSMUST00000083268 113 ntBASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
Trav3-3Q5R1C3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Gm23907-201ENSMUST00000104595 189 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Gm11857-201ENSMUST00000119817 324 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Gm23557-201ENSMUST00000157820 138 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Gm17100-201ENSMUST00000168963 272 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Gm27711-201ENSMUST00000183802 118 ntBASIC1.11□□□□□ -2.23
Trav3-3Q5R1C3 Gm29037-201ENSMUST00000189092 313 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms